Solanum dulcamara (climbing nightshade): 129899389
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Entry
129899389 CDS
T09577
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03015
mRNA surveillance pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129899389
09122 Translation
03015 mRNA surveillance pathway
129899389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdul03041
]
129899389
Spliceosome [BR:
sdul03041
]
Complex A
Other components
Complex A specific factors
129899389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
129899389
NCBI-ProteinID:
XP_055830314
LinkDB
All DBs
Position
8:complement(2721009..2726014)
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AA seq
483 aa
AA seq
DB search
MAGTYDYAGGRSAPPPADGGYSGSGGDGYDGSRGGGGYGAPGSGGGYGGSGGGGGYGGSG
GGGRYGGPGRGGSGGGYGSGSGSGGGYGAGGGDYGGYGNSDRGGGRGSRVYGGGSHNRGG
GEYQGGGGGGGGRGGGGSGRDGDWRCPNPSCGNLNFARRVECNKCGAPSPVDNDDRGSRG
GSGYSRGGYDGGYANNRGGRGDNYDKGGGGSNRYSSYFGNQGRDDGGYGHGPQVAPPSHG
GPYSNHPPPSNTYSGNPDYAPDAVHQPASYGGGPVSYPPSHASTVGYVGNTQSHARGGGR
GGSQGGYDGGYSGGPRTEVGSYDSAPAEAPAKVKQCDEQCGDSCDNSRIYISNLPPDVTI
EELQELFGSIGQVARIKQKRGYKDQWPWSIKLYSDEKGNNKGDAVLSYEDPSAAHSAGGF
FNNYDFRGYKISVAMAEKSAPKAPPAYGSGGGARGGYGGDRRRGNYGSGPERNYHGGNRS
RPY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctggtacatacgattacgccggcggcagatctgccccgccacctgctgacggagga
tacagtggatccggcggcgatggatacgatggatcgcgcggtggtggtggatatggtgct
ccgggtagcggtggcggatatggtggttctggtggcgggggtggatatggtggttctggt
ggcggtggtagatatggtggtccaggcagaggtggatccggtggtggatatggatcagga
tcaggcagtggagggggatatggtgctggaggtggtgattatggaggatacggtaacagt
gatagaggaggtgggagaggaagcagagtatatggtggtggttctcataatcgaggtggt
ggtgaatatcaaggaggaggtggtggcggcggtggaagaggtggtggaggaagtgggagg
gatggtgattggcgttgccctaatccgagttgtggaaacttgaactttgctcgaagagtc
gagtgtaataaatgtggtgcaccttcgcctgtggataatgatgatcgtggtagcagaggt
ggtagtggttacagtagaggtggatatgatgggggatatgcaaataatcgagggggaaga
ggcgataattatgataaaggaggtggaggaagcaatagatacagctcgtattttggtaat
caaggaagagatgatggtggttatggtcatggtcctcaagttgctcctccatctcacgga
ggcccgtatagcaaccatccaccaccgtccaacacttacagtgggaacccagactatgcc
cctgatgcagttcatcagcctgcaagttacggtggaggacctgtgtcatatcctccttca
catgctagcactgttggctatgttgggaatacacaatctcatgcccgtggtggtggtcgg
ggtggttcacaaggaggatatgatgggggatatagcggtggtcctcgaacagaagtaggt
agttatgacagtgctcctgctgaggctccagcaaaggtgaagcagtgtgatgagcaatgt
ggagattcctgtgataactccagaatatatatctcaaatttgcctcctgatgtcaccatt
gaagagctccaagaactttttggaagcatcggacaagtagcgagaatcaagcaaaaacga
ggttacaaggaccagtggccttggagcataaagttatactcagatgaaaaagggaacaac
aaaggggatgcagttttgtcatatgaagatccttctgcagcgcactcggctggaggcttt
ttcaataattacgacttcagaggttataagatcagtgttgcaatggctgagaaatctgca
ccaaaggctcctccagcatatgggtctgggggcggtgctcgaggcggttatggtggtgac
aggcgcagaggtaactatggttctggtccagagagaaactatcatggtggaaaccgctca
cgtccctactga
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