Solanum dulcamara (climbing nightshade): 129899515
Help
Entry
129899515 CDS
T09577
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129899515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129899515
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129899515
03029 Mitochondrial biogenesis [BR:
sdul03029
]
129899515
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
129899515
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
129899515
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
129899515
Mitochondrial biogenesis [BR:
sdul03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
129899515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
129899515
NCBI-ProteinID:
XP_055830492
LinkDB
All DBs
Position
1:5696422..5703756
Genome browser
AA seq
843 aa
AA seq
DB search
MTKDKGKLRTVAGPPRTLNVNKFAESRASELESLHSIVKERLSNDFRSQRSKRRRTTGHD
NRVAKSRVRKKQKPGEENLNKSDNLKNDKKTLPRHVRRRVELKKNSLNGFSTSGDGTKRL
RTHLWYAKRFTMTKLWGFHLPLGVQGRGRGSRALLKKLKGGVLVHDASYCSAIQLEGPQD
LLLSILKTVLVPSPYSHCEDARNDVLCGAIYGSAELHHVGATFSKTIAPVTYMWQPQQCR
KADTKVDHADICGEQQKIDGCASLRRLWVWIHAAAFSEGYNVLQNACERQVDAAGSRVSC
ISLEDHLGKLEVIGSRASELLQKILHPATCSVNSSLVKYASFIENDDQILSSAIFSLFVN
DPRFLNKDITDPLEAKSQNISYKKDENGGNRIPKRDMKLLSCSSLECEGSPGLSECIDLW
DAKEGIDPPMEENIICMEKHHQRMELFRVGDVNSGRQQTSVERRFSRVCPILLLKSDNQK
TSIIRWSIILPLCWIKVFWISLVTNGAQAIGLREKHWIACDLGLPCFPREFPDCNAHTCF
MALKEAAYDEKSELRSPQTRTGKVPVSSPWDCVRLALEGLSGAGHDWMQHEQLSPNDITK
NLKMNTPYSSRCITDIESSCSAPLEGLVARTSYVLTQFLDEISGSHLLLFPKVLHRTKCI
SKFMKDERIFNEDTDKGIYQINRDQKLCLVRVLLHAYREGSFEEGAVVCAPQIDDVMLFT
TRSKISKGELQVPESFVRSCFSQQATGKWEFQVPEDPATKESYRLPIGFITTGFVRGSKK
PVAVALCEAVCLAHLRGEQWKSVGVRKRRKDIYVLVRNLRSTAYRLALASIVLEQWEDDV
ECM
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagataaaggcaaacttcgaacagtagcaggtccgcctcgcacccttaatgtg
aacaaatttgctgagtctcgagcttctgaacttgaatctctccactcaattgtaaaagag
cgtttaagtaatgattttagatctcaaagaagcaagagaaggcgaacaactggacatgac
aatagagtggcaaaaagtagagttagaaagaagcagaaaccaggagaggaaaatctcaat
aaatcagacaatttgaagaatgataaaaagacgcttccacgccatgttcgtaggagagtt
gagcttaaaaagaattctctgaatggcttctcaacttcaggagatgggactaagagactc
agaacccacttgtggtatgctaagcgtttcacaatgacaaaactatggggattccacctt
cccctcggtgtgcaaggcagggggaggggatcaagagctcttctgaagaaactaaaagga
ggtgtacttgtacatgacgcaagttactgcagtgctatccagttggagggtccacaggat
ttgttgctgtcaatcctaaagactgtgcttgtgccttctccatactcacattgtgaggat
gctcgtaatgacgtactctgtggtgctatctatggtagtgctgagcttcatcatgtagga
gccaccttttctaagacaattgctcctgtaacctatatgtggcaaccgcagcagtgtagg
aaagctgatacaaaggttgatcatgccgatatatgtggtgaacaacagaagattgatgga
tgtgcttctttaagacggctatgggtttggatacatgctgctgctttcagtgaaggatat
aatgttttgcaaaatgcgtgtgaaaggcaggtagatgctgctggttccagagttagttgc
atttcccttgaggatcatcttgggaagttggaagtgattggatcaagggcatctgagctt
cttcaaaagattttacatcctgcaacatgttcagtaaattcttccctggtgaagtatgca
tccttcattgagaatgacgaccaaatcctttcttcagcaatcttttctctctttgtcaat
gatcctcgatttttaaataaagatattactgatcctttagaagcaaagagtcaaaatata
tcttataagaaagatgagaacggaggaaacagaattccaaaaagggacatgaagttactc
tcttgctcgtccttagaatgtgaaggaagtcctggcttatctgagtgtatagatctgtgg
gatgctaaagaaggcatcgaccctccaatggaagaaaacatcatttgcatggagaaacac
catcagcgtatggagttgtttcgcgttggcgatgtgaactcaggcaggcaacaaacttct
gttgagagacggttttctagagtctgccctatactgcttctgaaaagtgataaccagaaa
acttctattattagatggtctattattcttccgctgtgttggatcaaggtcttctggatc
tctcttgtgaccaacggtgctcaagcgattggtttgagggagaaacactggattgcttgt
gatcttgggttgccatgctttccaagggaattccctgattgcaacgcgcacacttgtttt
atggccttgaaggaagctgcttatgatgaaaagtctgagctccgttctcctcagacaagg
actgggaaagttccagtttcatctccatgggactgtgtccggcttgctctagaaggactc
agtggggcaggtcatgattggatgcaacatgaacagctttctccaaacgatataacaaaa
aacttaaaaatgaatactccatactcgagcagatgcataacagacatagagagtagttgc
agtgctccactcgagggacttgtggcaaggacgtcttatgttctgactcagtttttggat
gagatcagtggtagtcatctacttttatttcccaaagtgcttcacaggacgaagtgcata
tccaaatttatgaaggacgaaagaatattcaatgaggatacagataagggcatttatcag
attaatcgggaccaaaagctgtgtttggtcagagttcttctgcacgcctacagagaaggt
tccttcgaagaaggagcagttgtttgtgcacctcaaattgatgatgtaatgttgttcaca
accagatccaagatttccaaaggagaacttcaagtacctgagtcgtttgtgagatcgtgc
ttctcccagcaagcaactggtaaatgggaatttcaagtacctgaagatcctgctaccaaa
gaatcttatagattaccaattggctttattacaacaggatttgttcgaggaagtaagaag
cctgtagcagtggctctttgcgaggctgtctgtcttgctcacctgagaggggaacagtgg
aaatctgtaggtgttaggaaaagaaggaaggacatctatgtcctggttagaaatttaagg
tccacagcatatagacttgcacttgcttctatcgtcctcgaacaatgggaagatgatgtt
gaatgcatgtga
DBGET
integrated database retrieval system
