Solanum dulcamara (climbing nightshade): 129899520
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Entry
129899520 CDS
T09577
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdul03012
]
129899520
Translation factors [BR:
sdul03012
]
Eukaryotic type
Initiation factors
eIF-3
129899520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
SdpA
Motif
Other DBs
NCBI-GeneID:
129899520
NCBI-ProteinID:
XP_055830495
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All DBs
Position
8:complement(76556575..76562079)
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AA seq
907 aa
AA seq
DB search
MASRFWNQGDSETEEEEESDYEQQDEGPTETATTEAGSRYLAADDSDSDESDGQKRVVRS
AKDKRFDELSATVDQMKNNMKINDWVSLQESFYKINKQLEKVMRITESARAPNLYIKALV
TLEDFLTQALANKEAKKKMSSSNAKALNSMKQKLKNNNKQYEELINKYRENPPDSEDEGG
DDEESEEEFEEDPTKIAAATEEEDGVNKGPAKAKGWETMLSKKDKLMDKQFNDPSQITWD
TVNKKFKEIVASRGRKGTGRIELVEQLTFLTKVAKTPAQKLEILFSVVSSQFDVNPSLRG
HMPVNAWKKCVQNMLTILDMLTQYPNIVVDDMVEPDENETQKGSDYTGTIRIWGNLVAFV
ERIEVEFFKSLQVIDPHTREYVERLRDEPLFLVLAQNVQDYLVRVGDYMAAAKVALKQVE
FIYYKPQEVYDAMRKLAELAEGEGEGESADKNKVAEESKGPLAFVPTPELVPRKPAFGES
SRSLMDVLVSLIYKHGDERIKARAMLCDIYNHALFDEFSVSRDILLMSHLQDNIQHMDIS
TQILFNRAMAQLGLCAFRVGLVTEAQGCLSELYSAGRVKELLAQGVSQSRYHEKTPEQER
IERRRQMPYHMHVNLELLEAVHLICAMLLEVPNMAANSHDTRRKVINKNFRRLLEISERQ
TFTGPPENVRDHVMEATRALKQGDFLKTFDVIKSLDMWRLLKDKESVLEMVRAKIKEEAL
RTYLFTYSSSYNSLSLDQLSGMFDLSDSQVHSIVSKMIISEQLHANWDHPTRCVVFPDVE
HTRLQGLAFQLTEKLSILSETNERAMESRIGGGSLEGLQQRRRDGPDYAAAGAGKWKEFS
FSQGRQGSSGGRTGYNAGRFTSGQASRDRTGQPRTHGGSRYQTNAASRESHNLDGTRMVS
LNRGICA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcgtttttggaatcagggtgacagtgagactgaggaggaggaggagagtgat
tatgagcagcaggatgagggaccaactgagactgccactacagaggctggatcgaggtat
cttgcagctgatgatagtgatagtgacgagtcagatgggcagaagcgtgttgtccggtca
gccaaggacaagcgctttgatgaattgtcagctacagttgatcagatgaagaataacatg
aagatcaatgactgggtcagtctgcaagagagcttctacaagatcaataagcagctggag
aaggtcatgcgcatcacagagtcagctagagctccaaatctgtacatcaaagcattagtg
acgctggaggactttttgactcaggctttggccaataaggaggcaaagaagaagatgagt
agtagcaatgccaaagccttgaattcaatgaaacagaagttaaaaaataataataaacag
tatgaagagctgatcaacaaatatagggagaatcctcctgatagtgaggatgaaggtggg
gatgatgaagagtcagaagaggaatttgaggaggaccctacaaagattgcagctgcaacc
gaagaggaagatggtgttaataaaggtcccgctaaggcaaaggggtgggagaccatgctg
agtaagaaagacaaactaatggataaacagttcaatgacccaagtcaaatcacgtgggat
acagtcaacaagaagtttaaggaaattgtcgcttctaggggtaggaaggggactggaagg
attgaattggttgagcagctcaccttcttgaccaaggtggccaagaccccagctcagaag
cttgaaattcttttcagtgttgtctcttcccaatttgatgttaatccaagtctcagaggg
cacatgccggtaaacgcatggaaaaagtgtgtgcagaatatgcttaccatacttgacatg
ttgacccaataccctaatattgtagttgatgacatggtcgagcctgatgagaatgaaacc
cagaagggatcagactacacagggacaataaggatctgggggaacttggtagcctttgtt
gaaaggatagaagttgaattttttaagagcttgcaggttattgatccacatactcgtgaa
tatgttgagaggctgagggatgagccattgttcttggttcttgctcaaaatgtccaagat
tatttagtgcgcgtgggggactacatggctgctgcaaaagtggctcttaaacaggttgag
ttcatttattataaaccacaagaggtgtatgatgctatgaggaagttggctgaactagca
gaaggagaaggagagggagagtctgctgacaagaacaaggtggctgaggagagtaaaggt
ccactagcatttgttccaactcctgagcttgtgcccaggaaacccgcctttggagagagc
agcaggtcattgatggacgtccttgtttcgctcatttacaaacatggcgatgagcggatc
aaggcacgtgcaatgctctgtgacatatacaatcatgctctcttcgatgagttttcagta
tcccgtgacatcttgttaatgagtcacttgcaggataatatccagcacatggacatttca
actcagattctttttaacagagccatggctcagcttggtctctgtgcattcagggtggga
cttgttacagaagcacagggttgcctttctgaactgtattctgctggcagggtgaaggaa
ttacttgcacaaggtgtctcccaaagcagatatcatgagaagaccccggaacaggaaagg
atagaacgaagacgtcagatgccatatcatatgcatgtcaatcttgagcttcttgaggct
gtccatctgatatgtgccatgctactagaggtgccaaacatggcagccaatagtcatgac
acaaggcgcaaggtcataaacaagaacttccggagattgcttgaaattagtgagagacaa
acattcaccggcccacctgaaaatgttagggaccatgtaatggaagccacaagagccctc
aagcagggagatttcctgaagacctttgatgttatcaagtcccttgatatgtggaggctt
cttaaggataaagagagtgttcttgagatggttagagccaaaatcaaagaagaggccttg
aggacctatctttttacatattcttcttcttataactctctgagtttggatcagctttca
gggatgtttgacctttctgattcacaagttcatagcattgtgagcaaaatgattatcagt
gagcagcttcatgcaaactgggatcatccaactcgctgtgtggtcttccctgatgttgag
catacaagattgcagggtttggcattccagttgacagaaaagctttcaattctatcagaa
actaatgaaagagctatggagtccaggatcggtgggggttcattggagggccttcaacag
aggcgtagggatggcccggattatgctgctgcaggggctggtaagtggaaggagttctcc
ttttcacaaggcagacaaggaagcagtgggggccgaacagggtataatgccggtagattt
acctcagggcaagcatcaagggacagaactggtcagccccgaactcatggtggttcacga
tatcagacaaatgcagcttctagggaaagtcataatctggacggaactcgcatggtgagt
cttaacaggggtatctgtgcttag
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