Solanum dulcamara (climbing nightshade): 129900272
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Entry
129900272 CDS
T09577
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129900272
Enzymes [BR:
sdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
129900272
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
129900272
NCBI-ProteinID:
XP_055831179
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All DBs
Position
8:71600880..71603084
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AA seq
435 aa
AA seq
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MGTLKNRLSFFVILGTLVFSIEANIGEFDEVWRTRANQANKNAKEYYDPHPEKVADNLNK
HVHRSEEGSNSKRRDLHKYNGPCMATNPIDRCWRCDPHWAKNRQKLADCVLGFGHHTTGG
KGGKIYVVTDPGDNDMVNPKPGTLRHAVIQPGPLWIIFAHHMIIKLNQELIMTSNKTIDA
RGQQVHITGGASLMLQYINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRTRSDGDGISIF
GSTNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTHHNDVMLFGASDSYSQDSILQIT
LAFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPNPNA
KEVTKRDDAPESVWKDWVWRSQGDLMMNGAFFVESGNHNHKFMKGPDMIHPREGSDAGRL
TRFSGSLNCIEGKPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctcaaaaataggttgagtttctttgtaattttgggcacactagtttttagc
attgaggcaaatattggagagtttgatgaggtatggaggactcgagccaaccaagcaaat
aaaaatgctaaagaatactatgatcctcatcctgaaaaagttgcagataatctcaacaaa
catgttcacaggtcagaagaaggtagcaatagcaaaagaagggacttgcacaagtacaat
ggtccatgtatggctactaaccctattgatcgttgctggagatgtgacccacattgggct
aaaaatcgccagaagctagcagattgtgttcttggatttggccaccatacgactggtggc
aaaggtggcaaaatctatgtagtaactgaccctggggacaacgatatggtgaatcctaag
ccagggacactgcgtcatgcagtcattcagccagggccactatggatcatatttgcacat
cacatgatcattaagcttaatcaggaacttatcatgacaagcaacaagacaattgatgcc
agagggcagcaagtgcatattactggtggtgctagtttgatgttacagtacataaacaat
gtgattattcatggtcttcatatccatgatataaaggctggaaatggtggactaattaga
gactcgatcaatcattatggttttcgaacaagaagtgatggtgatggtatttcaatcttt
ggatcaacaaacatttggattgatcatgtttccatgtctaattgtgatgatggactcatt
gatgctgtgcaggcttcaactgctattaccatttccaactgccatttcacccaccataat
gacgttatgttgtttggagcaagtgacagctactcacaggactcaattctacaaataaca
cttgcttttaatcactttggccaagggctgatccagaggatgccaagagtgagatgggga
tttgttcatgctgtcaacaatgactatactcactggctaatgtatgccattggtggaagt
caacatcccaccatcctcagccagggcaatcgtttcatcgccccgcctaaccctaatgcc
aaagaggtgaccaaaagggatgatgcacctgagagtgtgtggaaggattgggtgtggaga
tcacagggagatctgatgatgaacggagccttcttcgtggaatctggaaatcacaatcat
aaattcatgaagggtcctgatatgatccaccccagggaaggatcagacgcgggcaggcta
acaagattttcaggctctttgaactgcattgaggggaagccttgttag
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