KEGG   Solanum dulcamara (climbing nightshade): 129900281
Entry
129900281         CDS       T09577                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129900281
Spliceosome [BR:sdul03041]
 Complex B
  Other components
   Complex B specific factors
    129900281
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_EML LisH_TPL ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 DUF7165 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR75_2nd VPS8_N Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_IP5PC_F Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 129900281
NCBI-ProteinID: XP_055831192
LinkDB
Position
8:67477338..67488727
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQSFQTLQNECQVSLNTVDSLETFIADINSGRWDA
VLPQVAQLKLPRKILEDLYEQIVLEMIELREMDTARAILRQTNVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYNDSTKEKRRAQISQALSAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDLYPTTLGHTIKFGKKSHPECSRFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTF
DGSRVITASSDGSVKVWDAKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVIKSFSSGKREGGDFVAACLSPKGEWIYCVGEDRNLYCFSYQSNKLEHL
MKVHEKDVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttctacactcgaaatcgaagctcgagatgtcattaagatagttcttcaattctgt
aaggagaactctctgcatcaatctttccagacattgcaaaatgagtgccaggtttctctt
aatactgtggatagccttgaaacctttatagctgatattaatagtggaagatgggatgca
gtactacctcaagttgcacaactaaagcttcctagaaagattctggaggatttatatgag
cagattgtcttagaaatgattgaacttcgagagatggatactgcacgagctattttaagg
caaaccaacgtgatgggtgtcatgaaacaggagcaaccagagagatatttgaggctcgag
catctactagttcggacttactttgatccacatgaggcttataatgactcaaccaaggag
aaaaggcgtgcccaaatttcccaagcactttctgctgaggtttctgttgttccaccatca
cgcttaatggctttgattggtcaagccttgaaatggcaacagcatcaaggtttacttcca
cctggaacacagtttgatctattccgaggaacagctgctatgaaacaagatgaagaggat
ttgtatccgacaacactcggtcacactattaagtttggtaagaagagtcatccagaatgt
tctaggttctcaccagatggacaatttcttgtctcatgctcagttgatggatttattgag
gtctgggatcacataagtggaaaactgaagaaggatcttcaatatcaggctgatgaaact
tttatgatgcatgatgatgctgtcctttgtgttgattttagcagagactcggagatgctt
gcgtctgggtcacaagatggaaaaataaaggtctggcgcataaggactggtcagtgcttg
cgtcgtcttgaacgtgcccattctcagggtgtcaccagtcttgtcttctctcgagatgga
actcagatcttaagcacatcctttgacagcacagcgagaattcatggcctgaagtcaggt
aaattgttaaaagaattccgcggacattcatcttatgtgaatgatgccatctttaccttt
gatggatctcgagtcatcaccgcatccagtgacggctcagtgaaggtctgggatgccaaa
actacggagtgtctgcagacatttagaccacctcctcctttaaggggtggtgatgcatct
gtgaattctgtccatcttttccctaagaataccgatcacattatagtgtgcaataagaca
tcatctatttatctgatgacacttcaaggacaggtcatcaaaagtttctcatctggtaaa
agagaaggtggagactttgtggctgcttgtctatcaccaaaaggagaatggatttactgt
gtaggtgaagacagaaacttgtactgctttagttatcaatcaaacaaactggaacatctg
atgaaggtacatgaaaaggatgtaattggtatcactcaccatccccatataaaccttgtt
gccacctatggagaagactgcaccatgaagctatggaagccttaa

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