Solanum dulcamara (climbing nightshade): 129900362
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Entry
129900362 CDS
T09577
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129900362
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129900362
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129900362
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
129900362
NCBI-ProteinID:
XP_055831294
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All DBs
Position
8:55631973..55637396
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AA seq
443 aa
AA seq
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MVNFWVFLLISFASLMASGATGSVILIRKNSTLSFEDIEANFAPSVKGSGKCGTLYVAEP
LDACSTLTNKIEPTNNFTKEPFVLIVRGGCSFEDKVRKAQAAGFKAAIIYDNAYGDIIAM
SGTSAGVKILAVFISKVSGEALTKYAGDPDMGVWIIPSSENSAWSIMATSFISLLAMSAV
LAMCFFVRRHHIRRELPRASRVREFHGISSRLVKAMPSLIFTSVVEDNSTSVTCAICLED
YCVGDKLRILPCRHKFHAVCVDAWLTSWRTFCPVCKRDARTSTGDPPALESTPLLSSSLR
SVSSISSLRSSLASSSVIHIGTGASRSPSVSRPQSISSSHNQHSLWSYHQSPHLTISRSS
LDLQNASSQRSRAAYLISSNSLGYPCLSPLNSRYGSAYIPSPSNPSSSYIGSTSRQLNPL
HHSESIASFSPFASANSLPGCES
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatttctgggtgtttttgttgattagttttgcttctttgatggcttctggagct
actggaagtgtgattttgataagaaagaacagtactttgtcttttgaagacattgaagct
aattttgctccctcagtaaagggttcaggcaaatgtggaacgttgtatgttgcagagcct
ttggatgcctgctcaaccttgactaacaagattgaaccaactaataacttcacaaaagaa
ccatttgtgctgatagtcaggggtggatgtagctttgaggataaagttagaaaagcacaa
gctgcaggttttaaagcagccattatctatgataatgcatatggtgatataattgcaatg
tcaggaacctctgctggtgtgaagatactcgcagtgttcatttcaaaagtttctggagaa
gcactcacaaagtatgctggtgatcctgatatgggagtatggataatcccaagctcggaa
aactcagcttggtcaatcatggctacatctttcatttcattacttgctatgtctgccgtg
cttgctatgtgtttctttgttcgccgacatcatatacgaagagaactgccccgagcttct
cgtgttcgtgaatttcatgggattagtagccgtttggttaaagctatgccaagtttgata
tttacatcagttgtggaggataattctacatcagtgacatgtgctatatgccttgaagat
tattgtgttggagataagcttagaattcttccatgtcggcacaaatttcacgctgtgtgt
gttgatgcttggctgacatcatggagaaccttttgccctgtctgcaaacgggatgcgagg
actagcactggtgatccaccagcattagaatctacaccattgctttcttccagtctgcga
tctgtatcttcaatttcctctctaaggtcgtcattagcttcatcatcagtgatacatata
ggcacaggagcatctcgatcgccttcagtttctcgccctcaatcaatctctagctctcat
aaccagcattcactttggtcctaccaccagtcgccacatcttactataagccgaagttca
ctcgaccttcaaaatgcatcttctcaaagatctcgtgcggcttacttaatttcatctaac
tcattgggttatccttgtctatcacctcttaattcaagatatgggtctgcatacattcct
agtcctagcaatccctcatcgagctatattggatcaacaagtcggcagcttaacccactg
catcacagtgaatcaattgcaagcttttcaccatttgcttcagctaactctcttcctgga
tgtgagtcgtga
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