Solanum dulcamara (climbing nightshade): 129900652
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Entry
129900652 CDS
T09577
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129900652
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sdul00535
]
129900652
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129900652
Meiosis-specific proteins
Cohesin complex and associated proteins
129900652
Proteoglycans [BR:
sdul00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129900652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
129900652
NCBI-ProteinID:
XP_055831641
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Position
8:complement(74196716..74221193)
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AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGYKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQALLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKQYQQLDKQRKSLEYTIYDKELHDARQKLN
EVEEARNKVAENSTKMYESVLEAHEKSKELEKLSKDLTKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMILEREVQETKNALNDIKPLHEKQVKEEED
ITRGIMDREKRLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSNLMQEKKLQDEI
DQLKKDMRDQDDIIKVRKVEVDKKESLISGYRNAYNQYKVDRDKLHDERKSLWTKETELN
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLECDDKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKKPHVNYPQGSDVIPL
LKKLRFSDSYCRAFEQVFARTVICRNLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLRFMSTIKQNTVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAGLGHDKS
ELEQLKQDIGNAERQRQSIIKALQKKEKLLGNILSQIDQLRANIAMKQDEMGTDLVDHLT
PEERDSLSRLNPEITALKEQLIVCRANRIETETRKEELEMNLSTNLERRKQELMAMNSSV
DVDMLQAEVESKNQELKDADSLVDHVTKELTRVSRSIDERNKRLKQIKQEKDNLKALEDK
YQNTLQDEARELEQLLSRRNTYLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEEDDNDPDDDEPRADVEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYSVSHKNRVSKVTVVSREGALDFIEQDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcatcattgaagggtataagagttatcgggaacaagtagccact
gaagatttcagtccgaaagttaactgtgttgttggtgcaaatggatctggcaagtctaac
tttttccatgcaatccgttttgtcgtaagcgacctctttcacaacctgcgcagtgaagaa
agacaggctttgcttcatgaaggagcaggtcatcaagtgttgtctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtgcggctgagaaga
acaatcggtctcaagaaggatgagtacttcttggatggaaaacatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttctctcggtctaatccctattatgttgtgcag
cagggaaagatagcatcattgacattaatgaaggattcggaacgacttgatctgctgaag
gaaattggagggacacgtgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgtacaatacttggacgagagattg
aatgagcttgaacaagagaaggaggaactgaaacaatatcaacagcttgacaagcagcgt
aaatctctggaatacacgatttatgacaaagaacttcatgatgcacgccagaaattgaat
gaggtagaagaggctcggaacaaagttgccgagaactctactaagatgtatgagagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgactaaagaa
attcaaattttaagcaaggagaaagaagcagtagagaaacagcggacagaggctattaga
aagcgagccaagcttgatcttgattacaaagaccttcaagagaagatgtccacaaatatt
aaagctaaagatgatgcacagaaacaactcatgattctggagagagaagttcaagaaaca
aagaatgcactcaatgatatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagagggattatggatcgtgaaaagagacttagcattctttatcagaaacaaggc
cgcgccacccaatttgcgagcaaagctgctcgggacaaatggctccagaaagaaattgat
gagtatgagcgagttttatcttcaaatttaatgcaggagaaaaagcttcaagatgaaatt
gatcagctcaaaaaagacatgagagatcaagatgatataatcaaagttcgtaaagttgaa
gtggacaaaaaagaatccctcatatctggttatcgaaatgcttataatcagtataaagtg
gatagagacaagctgcatgatgagcggaagtctctgtggacaaaggagactgagctgaat
actgaaattgaacggctcaaggctgaagttgtgaaggcagagaaaagcctagatcatgca
actcctggggatatcagaaggggtctgaattcagtaaggaggatttgcagagagtatgaa
atctctggagtatttggaccaatttttgagttgcttgaatgtgacgataagttttttaca
gctgttgaagttactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgcacaaaaaggtggacgagttacgtttattcca
ttgaacagggttaaaaaaccacatgttaattatccacagggctctgatgtgattccactt
ctgaagaaattgagattttctgattcatattgtagggcatttgagcaggtgtttgcaaga
actgtaatttgtcgaaatctggatgttgccactagggttgctcgtactgatgggcttgac
tgtatcactctggaaggtgaccaagttagtaaaaaaggtggcatgactggtggattttat
gatcatagacgctcaaaattgaggtttatgagcaccatcaaacagaatacagtgtccatc
aacctgaaggagcgggagcttgaggaagttagatataaacttcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctggcctgggtcacgacaagtct
gagttagaacagcttaaacaagacattggtaatgctgaaagacagagacaatccatcata
aaagctcttcaaaagaaggagaaactgcttggtaatattctgagtcaaatagatcagctc
agagctaatatagctatgaaacaagatgaaatgggaacagaccttgttgatcatttaacg
ccggaagaacgagattctttgtcacgtttgaaccctgaaatcacggctctgaaggagcag
ctgattgtgtgcagggcaaatcggatagagactgaaactagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaaacaagagttgatggcaatgaattcttctgtt
gatgttgatatgctacaggctgaagttgagagcaagaatcaggaacttaaggatgcggac
tcactagttgaccatgtgactaaagagcttacaagggtttctcgaagtatagatgaacga
aacaagaggctcaagcagatcaaacaggaaaaggataatctgaaggctcttgaagataag
tatcagaatacacttcaggatgaagcaagagaactggaacaactactaagtagacggaac
acctatcttgccaagcaagaagagtactctaagaaaattcgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaacgtaaaagaattatataagatgctgcac
aagtgtaacgagcagctacaacagttcagccatgtaaacaaaaaggcacttgatcaatat
gtaaattttaccgagcaaagagaagaactccaaagaaggcaagctgaactggatgctggg
gatgagaaaatcaaggaacttatatctgttttggatatgaggaaagatgaatctattgag
cgcacgttcaagggcgtggctaaacatttccgtgaagtattctctcagcttgtacaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggtgaggaagatgacaatgatcct
gatgatgatgagccgcgtgctgatgtagagggaagagttgagaaatatattggtgtgaaa
gtgaaggtgtcattcaccggacaaggagaaacacagtcaatgaaacagttatcagggggc
cagaaaactgtggtagcgctggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcagtacagaacggctgtgggt
aatatggttcgtgatttggcagacaggggtagcacacaatttatcacgacaacatttcgc
ccagagcttgtgaaagtggctgataagatatatagtgtgagccacaaaaatagagttagc
aaggtcactgttgtgtccagggaaggagccttagattttattgagcaggatcaatcacat
aattga
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integrated database retrieval system
