Solanum dulcamara (climbing nightshade): 129900688
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Entry
129900688 CDS
T09577
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129900688
04121 Ubiquitin system [BR:
sdul04121
]
129900688
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129900688
Membrane trafficking [BR:
sdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129900688
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129900688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
HypA
zf-RING_16
zf-RING-like
Rad50_zn_hook
zf-HC5HC2H
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
129900688
NCBI-ProteinID:
XP_055831676
LinkDB
All DBs
Position
8:6004374..6006061
Genome browser
AA seq
384 aa
AA seq
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MSSYWCYRCTRFVRISAGNDVVCPHCDSGFIEGAEGNIGSPESRRRFPMWNDRPELDRSV
NMGSRRSRRNRGDRSPFNPVIVLRSPSEAPGEDEAAAAAEERSYELYYDDGEGSGLRPLP
PTMSEFLMGSGFDRLLDQLAQIEVNGFGRPENPPASKSAIESMPIIHIASNHVNSETHCA
VCKEAFDLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPAESTETTNLDNIARPR
NEEEAMGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGVPRRIAWTSRRS
NTGRNRSGITRIFNNFTSFFRRLTPSSQRRSLSIHSTSSDSSGSGSGSAVFRSRSVSTTS
IFSRYLRRSRRNWVPEEHNGVTRW
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtactggtgttaccggtgtacgagatttgttagaatttcagctgggaacgac
gttgtttgtcctcactgtgatagtggatttattgaaggtgctgagggtaatattgggtcg
ccggaatctcgacggaggtttcctatgtggaatgaccggccagagttagatcggagtgtg
aacatgggttctcgccggagcaggcgtaatcgtggtgatagatctccgttcaacccagtt
attgttcttcgtagtccatctgaagctccaggggaggatgaagctgctgctgctgcagag
gaacggagttacgagctttactatgatgatggtgaaggttcaggtctccggccgttgccg
ccgacgatgtcggagtttttgatgggatctgggtttgatcggttacttgatcagttagca
cagatcgaggtaaatggttttggtcggccggaaaatccaccggcgtcgaaatcagcgatt
gaatcgatgccaattattcatatagcttcgaatcatgtaaattccgagacccattgcgct
gtttgtaaagaagctttcgatttaggatctgaagctcgagaaatgccatgtaaacacatc
taccattccgattgtattcttccatggctgtctctccgaaattcgtgccccgtttgccga
cacgaattaccggcggaatcaacggaaactacaaacctcgacaacattgctcgtcctaga
aacgaggaagaagcaatgggattgacaatatggagacttcccggaggtgggtttgccgtg
ggaagattttccggtggaagaaggggagctgagagagaacttccggtagtttatacagaa
atggacggtggatttaacaatggggtacctagaagaatagcttggacatcaagaaggagc
aatacaggtcgaaatagaagtggaataacccgaattttcaacaatttcacatcatttttc
cggcgattaacaccgtcttctcaacgccgatctttatccatacattccactagttcggat
tcatccgggtctggttctggatctgctgttttcaggagccggagtgtgtcaactacttca
atattcagtaggtatttgagaagaagcagaagaaattgggtaccagaagaacataatgga
gtaaccagatggtaa
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integrated database retrieval system
