| Entry |
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| Name |
(RefSeq) protein GAMETOPHYTE DEFECTIVE 1-like
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| KO |
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| Organism |
sdul Solanum dulcamara (climbing nightshade)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sdul00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129900709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:sdul03009]
129900709
03016 Transfer RNA biogenesis [BR:sdul03016]
129900709
03029 Mitochondrial biogenesis [BR:sdul03029]
129900709
Enzymes [BR:sdul01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
129900709
Ribosome biogenesis [BR:sdul03009]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
129900709
Transfer RNA biogenesis [BR:sdul03016]
Eukaryotic type
5'processing factors
Ribonucrease P
129900709
Mitochondrial biogenesis [BR:sdul03029]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
129900709
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(8665836..8672363)
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| AA seq |
699 aa
MGFFDLNIPYYESDRNIITDKKTLKAIRLKLIIRAMELGYSGIAYNRIFKGVMSESDRCC
IPLFPLSSVLKLAPSLSSAVEFHRKLLNVPVSSPFRQYTRLTVVVDSSSQASALNSGNPI
LKSYDIVAVRPLNQQAFEQACQVSEVDIIAIDFSDKSPFRLKQSMVKAAIQRGVYFEITY
SSLILDAQMRRQTISNAKLLVDWTRGKNLLFSSAAPSVTELRGPYDVVNLASLLGLQLER
AKAALSKNCRTVITNALRKKCYHKEAIRVEPITSGMKEPEFDDWLKWDPISSGEGDLLLD
DIQKSFSVSRNVPKDVKPIDFGSIVNNLPAHGLRIKDLISSTASGQVPVDTIAELAGVQV
DEMALPSSGTSQQPGGVNFLPVECSILEDNLDKKQQGSGSEKVGVPCLSLAPSNDAANLE
KEEENSRIDNEETQFTLKLDIKDTSGTKMHDLQTETSSVSCEGNAVLLDDVTIHTRIRDI
EVRENSMIDNEEMEITDKLDVQDTTSENKICDFQPGTCSARGNGYAVLPKSASNYTCRTD
SEVALSASSSLADVTLSKDEIFTGSNVQQLGISGRVNTDFHDQIGADGGVLIGTRVSNKP
TEKEQFREIRYHSTTLPDGSTNSEHSNPMEVDNDCLVAEKVPSKDVTEGELKHAGDNSGL
SHQLLGGSLSGNMKRRTSYRLSLFPFKRLLTRRPSTFRG |
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| NT seq |
2100 nt +upstreamnt +downstreamnt
atgggtttctttgaccttaacataccatactatgaatccgatagaaacattatcacagac
aaaaaaaccctaaaagccatacgtctcaagctcataatcagggcaatggagttgggttac
tcgggaatagcatacaatcgcattttcaaaggtgtaatgtcggaatcagatcgttgttgt
atccctttattccctctttcatctgttttgaaacttgcaccttcgctttcctcagccgta
gagtttcatagaaaactcttaaatgtccctgtttcatccccttttcgtcagtacacgcgt
ttgactgttgtggttgatagttcgtctcaggcttctgctcttaattctggaaatccgatt
ctgaaaagctatgatattgttgcggtgagacccctcaatcagcaggcgtttgaacaggct
tgccaggtttctgaggtggacataattgctattgatttctcggataagtctccatttagg
ttgaagcaatctatggttaaagctgcaattcagcgtggagtgtattttgagattacatac
tcaagtcttattttggatgctcaaatgagaaggcaaactatatctaatgctaagttgctg
gtggattggactcgaggaaagaatcttctcttctctagtgctgctccttctgtaactgaa
cttagagggccgtatgatgtagtgaatttggcttctttgcttggtctccaactggaacgt
gctaaagcagcgctttccaaaaattgtagaactgttataactaatgcgttaaggaaaaag
tgttaccacaaggaggcaattagggttgaaccaataacatcaggcatgaaggaacctgaa
tttgatgattggctcaaatgggatcctatctctagtggtgagggtgatttgctgttagat
gacatccagaaatctttttcagtctccagaaatgtaccaaaagatgtaaaacccattgac
tttggttcaattgtgaacaacctgcctgcacatggactccggattaaagatttgatatct
tcaacagcgtcagggcaggttcctgtggatactattgcagaattggcaggtgttcaggtg
gatgagatggctcttccaagttctgggacatcacaacaaccaggcggtgtcaattttctg
ccggtagaatgttcaattctagaagataatctggataaaaaacaacagggttctggttct
gaaaaagttggggtgccatgtttgtcccttgctccttcaaatgatgctgctaatttggaa
aaagaagaggaaaacagtaggattgataatgaggaaacacaatttacattgaagttagat
ataaaagatacatctgggaccaaaatgcatgatttacaaacagaaactagttcagttagc
tgcgaaggaaatgcagtcttgctagatgatgtgacaatccacacccgcataagagatatt
gaagtcagagaaaatagtatgattgacaatgaggaaatggaaattacagataagttagat
gtgcaagatactacttctgagaacaaaatatgtgattttcaacctggaacttgttcagct
agaggtaatggatatgctgtcttgccaaagagtgcatcaaactatacttgcagaacagat
tctgaagtcgctctctctgctagttcttccttggcggatgttacactttcaaaggatgaa
attttcactggttcaaatgttcagcagcttgggatctcaggtagagttaacacagatttc
catgatcaaattggtgcagatggtggagtcttgattgggacacgagttagtaacaaacca
acagagaaagaacaatttagggagataaggtatcattctactaccttacctgatggatca
accaacagtgagcatagcaatccaatggaagtggataatgactgtttagttgctgagaag
gtgccaagcaaagatgttacagagggagaactgaaacatgctggtgataattctggacta
agccatcagctcctgggtggatctttgtcagggaatatgaaacgtaggacatcttatcgg
ctttcgttgtttcctttcaaacgcttgttgactcgtaggccttccactttcagaggctga |
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