Solanum dulcamara (climbing nightshade): 129900774
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Entry
129900774 CDS
T09577
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
sdul03015
mRNA surveillance pathway
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129900774
09122 Translation
03013 Nucleocytoplasmic transport
129900774
03015 mRNA surveillance pathway
129900774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129900774
03041 Spliceosome [BR:
sdul03041
]
129900774
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129900774
Spliceosome [BR:
sdul03041
]
Complex C
Other components
EJC/TREX
129900774
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
129900774
NCBI-ProteinID:
XP_055831795
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All DBs
Position
8:66835873..66841187
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AA seq
193 aa
AA seq
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MANPEEAVDFEPEEDDLMDEDVDASSPRAPIPKLKSAITGGGSSASKKIKGRGFREETAE
AERNARLSARFDSLDSEGGPGPERSIEGWIILVTGVNEEAQEDDLHNTFGEFGEIKNLHL
NLDRRSGFVKGYALIEYENFEEAERAISEMDGNELLTQTIHVDWAFSKGPFRRRNARRRS
PHSRRSRSPRRRF
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccggaggaggctgtggatttcgagccagaggaagacgatctgatggacgaa
gacgttgacgcttcgtcacctagggcaccgataccaaagctgaaatcagccattacaggc
ggtggttcttctgcttctaagaaaatcaaaggccgtggtttccgtgaagagactgctgag
gctgaaaggaatgctcgcctttctgctcgatttgattctctcgactccgaaggtggccct
ggacctgaaagatccattgaaggatggattattttagtcactggagttaatgaggaggca
caagaagatgatcttcataatacatttggtgagttcggggagatcaagaatttgcatttg
aatctggatcgtcgttctggatttgtcaagggttatgcacttattgaatatgaaaacttt
gaagaagcagagagagctatcagtgaaatggatgggaatgagctgctcactcagactata
catgttgattgggcattcagcaaaggtccttttagaaggagaaatgctaggagaaggtca
ccacatagtcgtcgttctagaagtcccaggaggagattctaa
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