Solanum dulcamara (climbing nightshade): 129900820
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Entry
129900820 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04120
Ubiquitin mediated proteolysis
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129900820
04120 Ubiquitin mediated proteolysis
129900820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129900820
04131 Membrane trafficking [BR:
sdul04131
]
129900820
04121 Ubiquitin system [BR:
sdul04121
]
129900820
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129900820
Chaperones and folding catalysts [BR:
sdul03110
]
Other chaperones and cochaperones
Others
129900820
Membrane trafficking [BR:
sdul04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129900820
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
U-box type E3
129900820
Multi subunit type E3
STUB1-CHIC2 complex
129900820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_2
TPR_1
TPR_11
TPR_17
TPR_14
TPR_16
TPR_8
ANAPC3
zf-NOSIP
TPR_9
TPR_12
zf-Nse
TPR_19
HAT_PRP39_N
BRO1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129900820
NCBI-ProteinID:
XP_055831860
LinkDB
All DBs
Position
8:77992914..77997236
Genome browser
AA seq
277 aa
AA seq
DB search
MAPIVGSKQAEQLKQDGNNYFQKNRFGAAMDAYTEAITLCPNVPIYWTNRALCHRRRNDW
KRVEEDCRKAVQLDQNSVKAHYYLGLALLQKEQFAEGVRELEKALDLGRGANPGSYIVEE
IWEALAKAKYMEWEHESTRRSWELQNLKESCESALKEKHMLDSSHTEGLKDESSTSLLKQ
LEAVGEVFMKAAADDTPTEVPDYLCCKITLDIFRDPVITPSGFTYERAVILEHLQKVGKF
DPITREPLFPSQLVPNLAIKEAVQAFLDRHGWAYRIQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaatcgtgggttcaaagcaagcggaacaactgaagcaagacgggaacaattac
tttcagaagaatcgatttggggctgccatggatgcttataccgaggcaattactttgtgt
cctaatgttccgatatattggaccaatcgtgctctgtgccatcggaggcggaatgactgg
aaaagagtggaggaagattgtagaaaagctgttcagctggatcaaaattctgtaaaggcc
cactattatcttggtcttgcattgctacaaaaggaacagtttgctgaaggcgtgagagaa
ttggaaaaggcattagaccttggaagaggtgcaaatccaggaagttacattgttgaagag
atctgggaagcgcttgcaaaagcaaaatacatggagtgggagcatgaatctacaaggcgt
tcctgggagcttcagaacttgaaagaatcctgtgagtcagctctcaaggagaaacatatg
cttgacagttctcacacagaagggctcaaagatgaaagctcaacatctcttttgaagcaa
ctggaagctgtaggtgaggttttcatgaaagctgctgcagatgatactccaaccgaggtt
cctgattacttgtgttgtaaaatcactcttgatatttttcgcgaccctgtaattactccg
agtgggtttacatacgagcgggctgtgatccttgagcatttgcaaaaggtgggcaaattt
gatccaatcacacgagaaccactttttccatcccagttggtaccaaatctggccataaaa
gaagctgtgcaggcatttttggataggcatggctgggcatacaggatacagtaa
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