Solanum dulcamara (climbing nightshade): 129900914
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Entry
129900914 CDS
T09577
Name
(RefSeq) RING-H2 finger protein ATL74-like isoform X1
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129900914
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129900914
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
129900914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_4
FANCL_C
zf-C3HC4_3
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
129900914
NCBI-ProteinID:
XP_055831973
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Position
8:46980875..46983279
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AA seq
205 aa
AA seq
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MEVYHRPYRLLLDPHPVIPPSSTVSKPHHGYSNEANFDTNMVIILAALLCALICALGLNS
IVKCALRCSRRFAFESENARLAATGLKKSTLRQLPLSVYGSGVSIPATDCPICLGEFVDG
EKVRVLPKCHHGFHVKCIDIWLALHSSCPTCRQSLLEHNTTTAAGDVETGLRQPPTAPSI
AAAEELRCQMSMVRWRSCYYGQLIM
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttatcatcgtccttacaggctacttcttgatcctcatcctgttatcccacct
agtagtacagtaagcaaaccccaccatggttactcaaacgaagcgaattttgacaccaac
atggtgatcattttagctgctctgctctgtgcattaatatgtgctcttggcctgaattca
attgtcaagtgtgctttacgttgcagccggagatttgctttcgagtcagaaaatgcgcgt
ctagctgctacagggctgaaaaagagcacactgaggcaacttcccctgtctgtttatgga
tcaggagttagtattccagctactgactgtcccatttgccttggggaatttgtggacggt
gagaaagtgagagttttgcctaaatgtcaccatggatttcatgtgaagtgcatagatatt
tggttggctttacattcttcatgtccaacatgccgacaatcattgctggaacacaacaca
acgacagcagcaggggatgttgaaactggattgaggcaacctcctactgctccttcaata
gctgctgctgaggagttgcgttgtcagatgtcaatggtaagatggaggtcttgttactat
ggccagctaatcatgtag
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