Solanum dulcamara (climbing nightshade): 129900942
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Entry
129900942 CDS
T09577
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129900942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129900942
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129900942
03012 Translation factors [BR:
sdul03012
]
129900942
04131 Membrane trafficking [BR:
sdul04131
]
129900942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129900942
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129900942
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129900942
Translation factors [BR:
sdul03012
]
Eukaryotic type
Elongation factors
129900942
Membrane trafficking [BR:
sdul04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
129900942
Exosome [BR:
sdul04147
]
Exosomal proteins
Proteins found in most exosomes
129900942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
129900942
NCBI-ProteinID:
XP_055832007
LinkDB
All DBs
Position
8:complement(12195751..12198098)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagattcacatcagtattgtggtcattggccacgtcgactctggaaag
tcgactaccactggacacttgatctataagcttggtggtattgacaagcgtgttatcgag
aggttcgagaaggaagctgctgagatgaataagaggtcattcaagtatgcttgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcaccattgatattgccttgtggaagttt
gagaccactaagtactattgcactgtgattgatgcccctggacacagagactttatcaag
aacatgatcactggtacctcacaggctgactgtgctgtcctgattattgactccaccact
ggtggttttgaagccggtatctctaaagatggtcagacccgtgaacatgctttgcttgct
ttcacccttggtgtcaagcaaatgatttgctgctgcaacaagatggatgctaccaccccc
aagtactccaaggctaggtatgatgaaattgtgaaggaagtttcttcctacctcaagaag
gtgggttacaaccctgacaagatcccctttgtccccatatctggttttgaaggagataat
atgattgagagatctactaacctcgactggtacaagggcccaactctccttgatgctctt
gaccagatcaatgagcccaagaggccatcagacaaacccctccgtcttccacttcaggat
gtttacaagattggtggtattggaactgtccctgttggtcgtgtggagactggtgtaatt
aagcctggtatggttgtaacctttggccctactggtttgacaactgaagtcaagtctgta
gagatgcaccacgaagctctccaagaggcactccctggtgataatgttgggttcaacgtt
aagaatgttgctgttaaggatcttaagcgtggttatgttgcctcaaactccaaggatgac
ccagccaagggggcagccagcttcactgcccaggtcatcatcatgaaccatcctggccag
attggcaacggatatgcaccagtgctggactgccacacatcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
tttttgaagaatggtgatgctggtatggttaagatgattcccaccaagcctatggttgtt
gagacctttgctgagtacccaccattgggtcgttttgctgtgagagacatgaggcaaact
gttgctgtcggtgttgtcaagaatgttgacaagaaggacccaactggtgccaaagtcacc
aaggctgcccagaagaagaagtga
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