Solanum dulcamara (climbing nightshade): 129901037
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Entry
129901037 CDS
T09577
Name
(RefSeq) E3 ubiquitin protein ligase DRIP2-like isoform X1
KO
K16277
E3 ubiquitin-protein ligase DRIP [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129901037
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129901037
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129901037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
129901037
NCBI-ProteinID:
XP_055832120
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Position
8:complement(78733654..78741486)
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AA seq
425 aa
AA seq
DB search
MPNQVVKVKREKIAACITCPLCHKLFRDATTISECLHTFCRKCIYKKLSDEETECCPICN
IDLGCVPLEKLRPDHNLQDIRAKIFPYKRQKVQAPEVVPSVTPPIRRKERSLSSLVVSTP
RVSTQTGTTGRRSKSVARKALRGSTFSVEKPVKKEESSGEDQLDSASSPETLNKLTQNIR
QNSSSVELFGQPAPDNETENGMDLWEGKVDLWKPLNCLVEAANRSKSAKFTSQGCLHSLD
NEAHVRKTKGKKQGLEIKVHDNKNNSGPANLGSDKPKKMRRNSQKKASEFGGCSISPQTV
LDAIATKCERRNNPIWFSLVASEDQEGDAPLPQISAGYLRIKDGNVPVSYIQKYLMRKLD
LISEDEVEIRCMGQLIVPTLQVNTLVDMWLETTTSERVPVITGSSAKDFVMVLIYARKVP
GHPAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatcaagtggtgaaagtgaagagggagaaaattgcggcatgcattacatgccct
ctttgtcataagctattcagagatgctactactatttctgaatgtcttcatacgttttgc
aggaaatgcatctataagaagctctctgatgaagaaacggaatgctgtccaatatgcaat
attgacttgggctgtgtcccattagagaaattgaggccagatcataatctgcaagatata
agagcaaagatattcccttacaagaggcaaaaggtgcaagcacctgaagttgtgccttca
gttacccctccaatcaggagaaaagagagatcactgtcatcacttgtggtcagtactcca
agagtatcaacacagactggaacaacaggaagaagatcaaagtcagtggcaagaaaagca
ttacgaggctccacattttctgttgagaaacctgtcaagaaagaggaaagttctggagaa
gatcagctggatagcgctagttcacctgagactttgaacaagttgactcagaacattagg
cagaattcttctagtgttgagctatttggccaacccgcacctgataatgaaacagagaat
ggcatggatctgtgggaaggtaaagttgatttgtggaaacctttgaactgtttggtggaa
gcagcgaaccggagtaagtctgcgaagtttacttcccaaggttgtctgcattcccttgac
aatgaggctcatgtccgtaaaactaaagggaaaaaacagggactggaaatcaaagtccac
gataacaagaataacagtggacctgctaatttggggtccgataaacctaaaaagatgcgg
agaaatagccaaaagaaggcatcagaatttggaggatgtagtatttcaccacaaactgtg
ctggatgcaatcgctaccaaatgtgaaaggaggaataatccaatttggttctcgttagtg
gcctctgaagatcaggagggagatgcacccttgccccagatttccgctggttacttgaga
ataaaggatggcaatgttcctgtttcttacatccaaaagtatctgatgaggaagttagat
cttatcagcgaagatgaggttgaaattagatgtatgggccagttgatagtccccacttta
caagtgaatactttggtagatatgtggcttgaaactactacatccgaaagagtaccagtt
ataactggttcatcagcaaaggattttgtgatggtgctgatttatgctcgtaaggtcccg
ggccatccagcttcttga
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