KEGG   Solanum dulcamara (climbing nightshade): 129901189
Entry
129901189         CDS       T09577                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03018  RNA degradation
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129901189
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129901189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129901189
   03041 Spliceosome [BR:sdul03041]
    129901189
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129901189
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129901189
Spliceosome [BR:sdul03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    129901189
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 129901189
NCBI-ProteinID: XP_055832284
LinkDB
Position
8:complement(73867603..73871123)
AA seq 98 aa
MSTGLGLESLVDQTISVITNDGRNIVGVLRGFDQATNLILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDMSKLRAHPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcaactggacttgggcttgagtctcttgttgatcaaactatctcagttattacaaat
gatggacggaatattgtgggagttctgagaggattcgaccaggctacaaacttgattctt
gacgaatctcatgaaagagtttattcaacaaaggaaggtgtacaacaacttgtgttaggt
ctttatatcataaggggcgacaacataagcgtcgttggggaattagatgaagatctggat
agtaacttggatatgtcaaaactgagagcacatcctctaaagcccgtcgttcactga

DBGET integrated database retrieval system