Solanum dulcamara (climbing nightshade): 129901189
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Entry
129901189 CDS
T09577
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03018
RNA degradation
sdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129901189
09123 Folding, sorting and degradation
03018 RNA degradation
129901189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129901189
03041 Spliceosome [BR:
sdul03041
]
129901189
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129901189
mRNA degradation factors
5'-3' decay
Lsm complex
129901189
Spliceosome [BR:
sdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129901189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129901189
NCBI-ProteinID:
XP_055832284
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All DBs
Position
8:complement(73867603..73871123)
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AA seq
98 aa
AA seq
DB search
MSTGLGLESLVDQTISVITNDGRNIVGVLRGFDQATNLILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEDLDSNLDMSKLRAHPLKPVVH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggacttgggcttgagtctcttgttgatcaaactatctcagttattacaaat
gatggacggaatattgtgggagttctgagaggattcgaccaggctacaaacttgattctt
gacgaatctcatgaaagagtttattcaacaaaggaaggtgtacaacaacttgtgttaggt
ctttatatcataaggggcgacaacataagcgtcgttggggaattagatgaagatctggat
agtaacttggatatgtcaaaactgagagcacatcctctaaagcccgtcgttcactga
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