Solanum dulcamara (climbing nightshade): 129901198
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Entry
129901198 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129901198 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdul03021
]
129901198
Transcription machinery [BR:
sdul03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
129901198
TFIIIC, fungi type
129901198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_2
TPR_8
TPR_6
TPR_1
TPR_17
TPR_9
TPR_11
TPR_16
TPR_12
TPR_7
TPR_CcmH_CycH
ANAPC3
TPR_20
TPR_15
SNAP
TPR_NUP160_120_M
ARM_TT21_5th
HAT_PRP39_C
TPR_10
HrpB1_HrpK
NatA_aux_su
ChAPs
RPN7
HEAT_Nup120
Suf
TPR_EMC2
DUF2457
Motif
Other DBs
NCBI-GeneID:
129901198
NCBI-ProteinID:
XP_055832294
LinkDB
All DBs
Position
8:67790196..67816511
Genome browser
AA seq
953 aa
AA seq
DB search
MEEEKTLTEFDAFEHPMELELREGEEGGEADDEGDNNSKEADDEDEDEDEEDEEEEDDDG
SGEYKFQFNAEMDPLAFTEEDAFGRQPYQQFERLEHQYEALAAKKRKAQALEPPSEIPAK
KSRQEYHQEEGPGASYDEILEAMNYGMRRKSRKLKKRGRRKGSKSKVSSELKRKLGDATL
HYAHGRYEEAKRVLREVIRLSPNLPDPYHTLGLIYDAMGDKKRAMNFYMLAAHLSPKDAS
LWNLLVAWSTEQGDMKQTRYCLSKAITADPEDVSLRYQRASIYIELGDYQKAAESYEQIA
RRCPNDVEVLKKAVQFYRKCGKHECSVGILEDYLKNHQTEADLSVIHLLAVIHMEHNAHS
KALDLIECAKQRYFTGKQMPLNLSIKAGICHLHLGHIEEAEIIFSAVLSENASQHPDIVT
EVADSFMTLEYYESALKYYMMLVGDDNKNKGYLHLKIAECYVFLRERVQAIEYFYKAVNE
LEDSVDARLTLSSVLLEEDKDDEAASVLSPPKESEICGSFPESSVDSSSGKPKSWWLNSK
IKLKLCQIYRAKGSLEACVDVIFPLIRETLFLKSVQPKVKVRRRLSKSVLNQRIKVVDDH
RTDTIFHGFRPVALASDLSKAARAKKLLRKKEMLKEAKKAAALAAGADWKSDDSDSEFPE
HVYREPPLPDLLKDEEHLCLIVDLCKALISLQRYWDALEIINLCLKLASSTLSVEKKAEL
QALGAQVGYNIADPIHGFDCARSIVSQHPYSYAAWNCYYKVISRLDNRHPKHSKFMNNMR
IKHKDCIPPIIIAGHQFTMISHHQDAAREYLEAYKLMTDNQLINLCVGSALINVALGFRL
QNKHQCVLQGISFLYNNLRLSGNRQEALYNFGRACHHVGLVSEAAIYYQRVLDTHEDDYP
IPKLPNENPDPVENRKPGYCDLRREAAYNLHLIYKNSGAHDLARQILKDDCTV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaaaaactttaacagagtttgatgccttcgaacacccaatggaattggaa
ttgagagaaggagaagagggaggggaagcggacgacgaaggagataataacagtaaagag
gctgatgatgaagacgaagatgaagacgaagaggacgaagaagaagaagatgatgatgga
agtggagagtataaattccaattcaacgcagaaatggatcctttggcattcactgaagag
gatgcctttggacgccagccataccaacagtttgagcgcctcgagcaccaatatgaagct
ctcgctgccaaaaagcggaaagctcaagccctagaacctcccagtgagatcccagcaaag
aaatctaggcaagaataccatcaagaagaaggtccaggagcaagctatgacgaaatattg
gaagctatgaattatgggatgaggagaaaatcaaggaagctcaagaagagaggtcggcgg
aagggatcaaagagtaaagttagttcagaattgaaaagaaaacttggtgatgctactctt
cactatgcacatggccgttacgaagaggccaaacgtgtgttgcgtgaagtcattcgtctt
tcgccaaaccttcctgatccataccatacacttggcctgatttatgatgctatgggtgat
aagaagagagctatgaatttttacatgcttgcagcacatctgtcaccgaaggatgcatct
ctatggaatctcctggttgcttggtccacagagcagggagatatgaaacagacccgttat
tgtctttccaaagcaataacagctgaccctgaagacgttagtctcaggtatcaaagggct
tcaatatatattgaacttggtgattatcaaaaagctgcagagtcgtatgaacaaattgct
cgtcgatgccctaatgacgttgaagtacttaagaaagctgttcagttttacagaaaatgc
ggcaaacacgagtgctctgttggtatcctcgaagactacctgaaaaatcatcaaactgaa
gctgatttaagtgtgatacacctgttagctgtgatacacatggaacacaatgcacattca
aaagctcttgatctgattgagtgtgcaaagcaaagatattttactgggaaacagatgcct
cttaatttaagtatcaaagctggaatatgtcatttacatcttggccatatagaggaggca
gagattattttcagtgctgtactatctgaaaatgcatctcaacatcctgatatagttact
gaggtcgcggactcctttatgacacttgaatactatgaatcagctttgaagtactatatg
atgcttgttggagatgacaacaagaataaaggctatttacacttaaaaattgccgagtgt
tatgtatttttgagggaaagagtacaagcaattgagtacttctataaagctgtaaatgaa
cttgaggatagtgttgatgctcgattaactttatcatcagtcctccttgaagaagacaaa
gatgatgaagcagcttctgtgctttcccctcccaaagaatcagagatctgtggttcattt
ccagaatcttcagttgactcaagttctggtaaaccaaaatcttggtggcttaatagcaag
ataaagctgaagctttgccaaatttatagagctaaagggtcactagaggcttgtgtggat
gttatttttcctttgattcgtgagacattgtttctaaagtctgtccaaccaaaggtcaaa
gtgcggagaaggctgtctaaaagtgttctaaatcaaagaatcaaggttgtggacgatcac
cgaacagataccatctttcatggctttaggcctgtagctttggcatctgatctgtcaaaa
gctgcaagagcaaaaaaattgcttcggaagaaagaaatgttaaaggaagcaaaaaaagct
gcggctttggctgctggagctgactggaaaagtgacgattcggacagcgagtttcctgag
cacgtataccgagagcctccactaccagatcttctaaaagacgaggaacacctgtgtctt
attgtagatctctgcaaggctttaatatccttgcaacggtattgggatgcactagagatc
attaatctctgtctaaaattggcatccagcacattgtctgttgagaaaaaagcggagctg
caagctcttggagctcaagtaggatataacattgctgatcccatccatgggttcgattgt
gcacgttccattgtcagtcagcatccttacagctatgcagcatggaattgctactacaaa
gtaatatcaagactagataatcgacatccgaaacatagcaagttcatgaacaatatgcgt
atcaaacacaaagattgcataccaccaattattattgctggtcatcagtttaccatgatc
agccatcatcaagatgcagctagagagtatttggaagcttataagctgatgacagataat
cagttgataaatctctgtgtgggaagtgctttaataaatgtagctcttggattcagactt
cagaacaagcatcagtgtgtactacagggaatatctttcctgtacaataatttgaggctt
tcaggaaacagacaggaagcactgtataattttggtcgtgcttgtcatcatgttggtctt
gtttctgaagccgccatatattaccaaagggtacttgacactcacgaagacgattatccc
atcccaaagcttcctaatgagaacccagatcccgtggaaaatagaaaaccaggttactgt
gatctacgcagagaagcagcatacaatctgcacttgatttacaaaaatagtggagcacat
gacctggcaagacagatactgaaagatgactgtaccgtatga
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