KEGG   Solanum dulcamara (climbing nightshade): 129901271
Entry
129901271         CDS       T09577                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129901271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129901271
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129901271
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129901271
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 129901271
NCBI-ProteinID: XP_055832379
LinkDB
Position
8:complement(68287505..68293137)
AA seq 128 aa
MSWASPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI
YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagtccagaagatatctatctctctacttctcttgctagctatcttgat
aagaaacttctcgtgttgctgcgagatggccggaagcttttggggacacttcgttctttt
gaccaatttgctaatgctgttctagaaggtgcatgtgagcgtgttattgttggtgaaatc
tactgtgatattccgttaggtctttatattataagaggggaaaatgtcgtgttaattggc
gagttggatgtagataaggaggaacttccaccccacatgactcgtgtcccagaagctgag
ataagaagggcccaaaaagcagaaagggaggctacagatcttaaaggtacaatgagaaag
aggatggaattccttgatatggattga

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