Solanum dulcamara (climbing nightshade): 129901362
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Entry
129901362 CDS
T09577
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129901362
03036 Chromosome and associated proteins [BR:
sdul03036
]
129901362
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129901362
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129901362
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
129901362
microRNA pathway
RISC loading complex
129901362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
129901362
NCBI-ProteinID:
XP_055832487
LinkDB
All DBs
Position
8:complement(72662029..72671201)
Genome browser
AA seq
1054 aa
AA seq
DB search
MVRKRRTDVPGGAESSESHETGGGRGGVQRPSQQQQQGGGRGSGPQRGGYGGHGGGGAPR
GGMAPQQSYGGPPEYYQQGRGTQQYHRGGGQPQRRGGIGGRGAPSGGPSRPPVPELHQAT
ETLHQPVPYGRPSETYSEAGSSSQPPVPMAHQVTQQFQQLAVQPEEDATQVIPPASSKSM
RFPLRPGKGSNGTRCIVKANHFFAELPDKDLHQYDVSITPEVASRGVNRAVMEQLVKLYR
ESHLGKRLPAYDGRKSLYTAGPLPFVQKVFEITLIDDDDGPGGARREREFKVVIKLAARA
DLHHLGMFLQGRQADAPQEALQVLDIVLRELPTSRYCPVGRSFYSPYLGRRQPLGEGLES
WRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVSQLLNRDISSRPLSDADRVKIKKA
LRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKAVVEYFRETYGFVIQHTQ
LPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPQDRENDILQTVR
HNAYADDPYAREFGIRISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMV
NGGTVNSWICINFSRNVQDSVARGFCSELAQMCMISGMIFNPNPVLPPVSARPDQVERVL
KTRFHDAMTKLQPNGRELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFKMS
KQYLANVSLKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAA
VVASQDWPEITKYAGLVSAQAHRQELIQDLYKTWQDPTRGTVTGGMIKELLISFRRATGQ
KPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANN
HRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSAD
GLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVTSAAAPYRGG
VGAVGRSTRAPGASAAVRPLPALKENVKRVMFYC
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggaagaggagaactgatgttcctggtggtgccgagagctctgagtcccatgaa
actggagggggacgaggtggtgtccaacgcccatcacaacagcagcaacaaggtggagga
agaggctcgggacctcaacgtggaggatatggtggccatggtggtggtggagctccacgt
ggtggaatggcccctcaacagtcctatggtggacctcctgaatactatcaacagggcagg
ggaactcagcagtatcatcgaggtggaggacaaccccagcgccgtggtggtataggtggc
cgtggggcaccttctggtggcccttctaggccaccagttcccgagctgcatcaagctact
gagactctgcatcaacccgtaccatatggaagaccatcagaaacatactcagaggctggc
tcttcatctcagccacctgtaccgatggcacatcaagttactcagcagttccagcaactt
gctgtgcaaccagaagaagatgcaacccaagtaataccgcccgcatcgagcaagtcaatg
aggtttccacttcggcctggaaagggtagtaatggcactagatgcattgttaaggccaac
cacttctttgccgagttacctgacaaagacttgcaccagtatgatgtttcaattacccca
gaagtagcttcccgtggtgtcaaccgtgctgtcatggagcagctggtaaagctttacaga
gagtcccatcttgggaagaggcttccagcttatgacggaagaaaaagtctgtacactgca
gggcccctcccttttgttcaaaaagtttttgaaatcacacttattgatgatgatgatggg
cctggtggtgctaggcgagaaagggagtttaaagttgtgatcaagctggctgctcgcgct
gatcttcatcacttagggatgttcttacaagggagacaggctgatgcaccccaagaggcc
ctacaggttctggatattgttctgcgtgagttgccaacaagtaggtattgtcccgtgggc
cgttctttctattccccttatttaggacgaagacaaccactaggtgaaggtttagagagc
tggcgtggcttctatcaaagtattcgtcctacacagatgggattatccctgaatattgat
atgtcttccacggctttcattgagccactgccggtcattgactttgtgagccagcttctg
aaccgggatatctcttctagaccattgtctgatgctgatcgggttaagataaagaaggcc
ttgagaggtgtaaaggtggaggtcactcatcgtgggaatatgaggaggaagtaccgcata
tctggtttgacatctcaagcaacaagagagttgactttccctgttgatgaaagaggtaca
atgaaagctgttgtggaatattttcgagaaacctatggttttgtcattcagcatactcag
ttgccttgtcttcaagttggaaatacacaaaggccaaattatttgcctatggaggtctgc
aagattgtggaggggcagaggtactccaagcgcttgaatgagaggcagataacagcactt
ctgaaagtgacgtgccagcgtcctcaagacagagagaatgatattcttcagactgttcgt
cacaatgcttatgctgatgatccatatgcgagggaatttggtattaggattagcgagaag
cttgctcaagttgaggctcgcattttgcctgcaccttggcttaaataccatgatacaggt
cgagaaaaagattgtcttccacaagtgggccagtggaatatgatgaataagaaaatggtt
aatggaggaacagtgaacagctggatctgtataaacttttctcgcaatgtgcaagacagt
gttgcgcgtggattctgttctgagcttgcacaaatgtgcatgatatcgggcatgatcttc
aaccccaatcctgttctaccaccagtgagtgctcgccctgatcaagttgagagggtcttg
aaaactcgatttcatgatgctatgacgaagttgcagccaaatgggagggagctcgatctg
ttgatcgttatattgcctgacaataatggctccctttatggtgatctaaaacggatttgt
gaaactgatcttggcattgtatcgcaatgctgcttgacaaaacatgtatttaagatgagc
aagcagtatttagccaatgtgtcccttaagataaatgtgaaggttggaggaagaaacacc
gtgcttgttgatgcgatctctaggcgaattccccttgttagcgaccgtccaactattatt
tttggtgcagatgtaacccatcctcaccctggagaggattctagcccgtccattgctgcg
gtggttgcttctcaagattggcctgagattactaagtatgctggtctggtttctgctcaa
gctcataggcaggagcttatacaagatctgtacaagacttggcaagatccaactagagga
actgtgactggtggcatgataaaggaattgcttatttccttccgtcgagcgactggacag
aagcctcagagaataatattctaccgagatggtgttagtgaaggacaattttatcaagtg
cttctttttgaacttgatgcaatccgcaaggcctgtgcatctctagaacccaactatcag
cccccagttacatttgttgtggttcagaaacgtcaccacacaaggttgtttgccaacaac
caccgtgatagaaatgctgttgatcgaagtgggaacattttgcctggtactgttgtcgat
tcaaagatatgccaccctaccgagtttgatttctatctctgtagtcatgccggcatacag
ggtactagccgcccagctcattatcatgtcttgtgggatgagaacaatttttctgctgac
gggctgcagtctttgactaacaacctctgttatacatatgctaggtgtactcgttccgtc
tccattgttcctccagcctattatgcacatttggcagctttccgtgctcgtttttacatg
gaaccggagacatctgacagtggatctgtcacaagtgcagctgctccatacagaggtggt
gtaggagcagttggaaggagcacacgagcaccaggtgcttctgctgctgtgaggcccctt
cctgctctcaaggagaatgtcaaaagggtgatgttctattgttag
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integrated database retrieval system
