Solanum dulcamara (climbing nightshade): 129901442
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Entry
129901442 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129901442
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129901442
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129901442
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129901442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
Rad50_zn_hook
Zn_ribbon_6
zf-RING_10
Prok-RING_4
zf-Nse
zf-RING_4
TRAF3_RING
Sina_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
129901442
NCBI-ProteinID:
XP_055832593
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All DBs
Position
8:2253365..2258080
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AA seq
215 aa
AA seq
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MSTGDRSAQPIRRTRSQSRRNTVLNVDLNAAPPAENRDQEGAPIHVVSGDTTHGLRGASL
TPAAIDVEALDDDVIISSPRAFAAAKNNARRNQGRVIVLDVDSEDRTSRGNSRDKRRRAS
TNQATNNGDIHIDLEGHSCPRRVDLKSVIPAPPKEPTFSCPVCMGPLVEEVSTKCGHIFC
KACIKASIAAQGKCPTCRRKLAMKDTIRVYLPTTS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccggagatagaagcgcacaaccaattaggcgtacaaggtcccagtcgagaaga
aatactgtgctaaatgtggatctaaatgctgcaccaccagctgagaacagagatcaggaa
ggagctcctattcatgttgtgtctggggatacaacacatggactaagaggtgcctctttg
acacctgcagcaattgatgttgaggcacttgatgatgatgtgattatatcatcccctagg
gcgtttgcagcagctaagaacaacgccagaaggaatcaaggtcgggttattgtgcttgat
gtggattctgaggaccgtacgtctaggggtaacagtcgagacaagcgtagaagagcctct
acaaatcaagcaacaaacaatggtgatattcacattgatctagaaggacatagctgtcca
aggagagttgatctaaaaagcgtaataccagcaccaccaaaagagcctacattcagctgt
ccagtgtgcatgggtccattagttgaggaggtgtcgactaaatgtggtcacattttctgc
aaggcgtgcataaaagcctccattgctgctcagggtaaatgtcctacgtgtaggaggaaa
ttggctatgaaagacaccataagagtatatcttcctaccacaagctaa
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