KEGG   Solanum dulcamara (climbing nightshade): 129901442
Entry
129901442         CDS       T09577                                 
Name
(RefSeq) uncharacterized protein LOC129901442
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129901442
Enzymes [BR:sdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129901442
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129901442
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 zf-ANAPC11 Rad50_zn_hook Zn_ribbon_6 zf-RING_10 Prok-RING_4 zf-Nse zf-RING_4 TRAF3_RING Sina_RING zf-RING_6
Other DBs
NCBI-GeneID: 129901442
NCBI-ProteinID: XP_055832593
LinkDB
Position
8:2253365..2258080
AA seq 215 aa
MSTGDRSAQPIRRTRSQSRRNTVLNVDLNAAPPAENRDQEGAPIHVVSGDTTHGLRGASL
TPAAIDVEALDDDVIISSPRAFAAAKNNARRNQGRVIVLDVDSEDRTSRGNSRDKRRRAS
TNQATNNGDIHIDLEGHSCPRRVDLKSVIPAPPKEPTFSCPVCMGPLVEEVSTKCGHIFC
KACIKASIAAQGKCPTCRRKLAMKDTIRVYLPTTS
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagtaccggagatagaagcgcacaaccaattaggcgtacaaggtcccagtcgagaaga
aatactgtgctaaatgtggatctaaatgctgcaccaccagctgagaacagagatcaggaa
ggagctcctattcatgttgtgtctggggatacaacacatggactaagaggtgcctctttg
acacctgcagcaattgatgttgaggcacttgatgatgatgtgattatatcatcccctagg
gcgtttgcagcagctaagaacaacgccagaaggaatcaaggtcgggttattgtgcttgat
gtggattctgaggaccgtacgtctaggggtaacagtcgagacaagcgtagaagagcctct
acaaatcaagcaacaaacaatggtgatattcacattgatctagaaggacatagctgtcca
aggagagttgatctaaaaagcgtaataccagcaccaccaaaagagcctacattcagctgt
ccagtgtgcatgggtccattagttgaggaggtgtcgactaaatgtggtcacattttctgc
aaggcgtgcataaaagcctccattgctgctcagggtaaatgtcctacgtgtaggaggaaa
ttggctatgaaagacaccataagagtatatcttcctaccacaagctaa

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