Solanum dulcamara (climbing nightshade): 129901499
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Entry
129901499 CDS
T09577
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129901499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129901499
04147 Exosome [BR:
sdul04147
]
129901499
04090 CD molecules [BR:
sdul04090
]
129901499
Enzymes [BR:
sdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129901499
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129901499
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129901499
CD molecules [BR:
sdul04090
]
Proteins
129901499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
AAA_21
RsgA_GTPase
AAA_30
AAA_5
Rad17
AAA_15
AAA_24
Zeta_toxin
nSTAND1
AAA_7
DUF815
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
129901499
NCBI-ProteinID:
XP_055832673
LinkDB
All DBs
Position
8:complement(259491..265040)
Genome browser
AA seq
1271 aa
AA seq
DB search
MDDEGNDSNENRGQQDSNKTKQMETVPFYKLFSFADSTDIVLMIIGTIAAIGNGLSIPIM
TVLFGELTDSFGENPSSKDVLRIVARVSLKFVYLALGCGMAAFLQVACWMISGERQASRI
RSLYLKTILQQDIAFYDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFVQLISTFLGGFVV
AFTKGWILTLVMLSIIPLLVISGGVMSLILSRMASRGQDTYAKAAAVVEQTIGSIRIVAS
FTGEKQAMTDYNESLIKAYRSGAKEGLASGLGLGSLFAIMYCSYALAIWYGARLILEKGY
TGGQVINVIVAVLTASMSLGQASPCMSAFAAGKAAAFKMFETIKRKPEIDAYDTNGKILN
DIRGNIELNDVYFSYPARPDEQIFGGFSLFVPSGTTAALVGPSGSGKSTVISLIERFYDP
QSGQVLIDGINLKDFQLKWIRGKIGLVSQEPVLFTASIKENIVYGKYDATTEEIKAAVEL
ANAAKFIDKLPQGLDTMVGQHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESE
RVVQGALDRIMINRTTIIVAHRLSTVRNADMIAVVHRGKVVEKGTHCELLKDPEGAYSQL
IRLQEVNKETEKSGLDERDRLDKSMGSGRQSSKRMSLLRSVSRSLSGIGNSSHRSLSISF
GLTTGLSVSETANEDTETGIQEVSGKPLKVPIRRLAYLNKPELPVIIIGTVAAIINGAIP
PIFGTLFANVIKTFYEPPQELRKDSRFWALMFILLAAITLIAFPARSYLFGIAGCRLIRR
IRSMCFEKLVHMEVGWFDESENSTGMIGARLSADAAAVRGLVGDALAQMVQDSATAIVGL
AVAFEASWQLALIVLAMIPLIGLNGYVQIKFMTGFSADAKMMYEEASQVANDAVGSIRTV
ASFCAEEKVMETYRRKCEGPLKAGIKQGLISGIGFGVSYALLFCVYATSFYAGALLVQAG
KITSADVFRVFFALTTAAIGISQSSSLAPDSSKAKAAAASIFAILDRKSKVDPSDDSGKT
SDTVKGDIELKHVSFKYPTRPDVQILRDLCLTIRSGQTVALVGESGCGKSTVISLLQRFY
DPDSGQISLDGIEIQKFQVKWLRQQMGLVSQEPVLFNDTIRANISYGKEGNAIEAEVLAA
AELANAHKFISSLQQGYDTIVGERGTQLSGGQKQRVAIARAILKNPKILLLDEATSALDA
ESERIVQDTLDRVVVNRTTVVVAHRLSTIKGADVIAVFKNGVIVEKGKHDTLINIKDGFY
SSLVALHTSSS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagggaacgattcgaatgaaaatagaggccagcaggattcaaacaagacc
aaacaaatggagacagttcctttttacaagctattctccttcgctgattccactgatata
gttttgatgatcattggaactattgcagctattggcaatggattgtccattcccattatg
actgttctttttggagaattgacagattcctttggagaaaacccaagtagcaaagatgtg
cttcgcatagttgccagggtctcactgaaatttgtctacttagctttgggatgtgggatg
gctgcatttcttcaggttgcttgttggatgatctccggtgaaagacaggcttctcgaata
aggagtctctatttgaaaactattttgcaacaagatattgctttctatgataaggaaaca
aatacgggagaggtggttgggaggatgtctggtgacactgttcttattcaagatgcaatg
ggagagaaggtagggaaatttgtacagctgatatcaacattccttgggggttttgtcgtt
gcatttaccaaaggctggattctcacgcttgttatgttatccatcattcctttacttgtc
atatctggtggagtgatgtccctcatcctatctaggatggcgtcccgtggacaagatact
tatgcaaaggctgcagcggtggttgaacagacaattggctccattagaatagttgcatca
tttacaggggagaagcaagctatgaccgactataacgagtccctaattaaagcttaccgt
tcaggtgcaaaggaagggctggctagtggattaggtcttggctcactttttgctattatg
tactgcagctacgctttggctatatggtatggtgcaaggctcatcttggaaaaaggatat
actggtggtcaagttataaatgtaattgttgctgtgttaactgcttccatgtccctggga
caggcatctccttgtatgtctgcattcgctgcaggtaaagcagcagctttcaagatgttt
gaaaccataaagagaaagccggagatagatgcttatgataccaatggaaaaatattgaac
gacatccgtggcaatattgaattgaatgatgtgtacttcagttacccagccagacctgat
gagcaaatattcggtggattttcactctttgtaccaagtggcacaactgcagctttggtt
ggaccaagtggaagtgggaagtcaacagtcataagtctgatagaaagattttatgatcct
caatctggtcaagttctgattgatggaattaatctcaaggacttccagcttaagtggatc
aggggaaagattggtcttgtgagccaagaacccgtacttttcacagcaagcattaaggaa
aatattgtgtatggcaagtacgatgctactactgaagagataaaagctgcagttgagtta
gcaaatgccgcaaagttcatagataaactcccacagggtctagacaccatggttggacaa
catggaactcaactttctggtgggcaaaagcaaagaattgccattgcaagagcaatttta
aaagatccacggatattactgttagatgaagcaacaagcgcattagatgcagaatctgag
agagttgtacaaggagctttggatagaattatgatcaacagaacaaccatcatagttgca
catcgattgagcacagtaaggaatgctgatatgattgcagtcgttcatcggggaaaagtt
gttgaaaaaggcacacattgcgaactactcaaggatcccgagggagcatactctcagctt
atacgcttacaagaagtgaacaaagaaacagaaaaatcaggcttagatgagagggacaga
ttagataaatctatgggatctggtaggcagtcaagtaaaagaatgtcattattacgatct
gtcagtcggagtttatctggcataggaaatagtagccaccgttcactctccatctcattt
ggtttaactactggacttagtgtatctgaaacagcaaatgaagacacagaaacaggtatc
caggaagtatcaggaaagcctttaaaggtccctattcgtcgcttagcctatctcaacaag
cccgagttacccgtgatcattattggaactgtggctgcaattattaatggtgctattcct
ccaatttttggcaccttatttgcgaacgtgatcaaaacattttatgagccaccacaggaa
ctaaggaaggactcaaggttttgggctctcatgtttattcttcttgcagctataacttta
attgcatttcctgcaaggtcataccttttcggtatagctggttgtaggttgataagaaga
attagatcaatgtgctttgagaagttggtccacatggaggtaggatggtttgatgaatct
gagaactccactggaatgattggtgctaggctttctgctgatgcagccgcagtccgtggt
ttagtaggagatgcacttgctcaaatggtccaagatagtgcaacagcaattgtaggttta
gctgttgcttttgaagcgagttggcagttggcacttatcgtccttgctatgatacctcta
attggcttaaatggatatgtccaaatcaagttcatgacaggattcagtgcagatgcaaag
atgatgtatgaggaagcaagtcaagttgcgaacgatgctgttggaagtataagaactgtt
gcatcattttgtgcagaagagaaggtgatggaaacatacagaagaaagtgtgaaggccca
ttgaaggcaggaataaagcaaggtttgattagcgggatagggtttggtgtatcatatgct
ttgctgttttgtgtatatgcaaccagtttttatgctggagctcttcttgttcaggctggc
aaaatcacctctgcagatgttttccgtgttttctttgctctgactacggcagctatagga
atttcccagtcaagctcattagctccagattcaagcaaggccaaggctgccgctgcttcc
atatttgctattcttgacagaaaatcaaaagtagatccaagtgatgattctggtaagaca
tcggacactgtgaagggagatattgagctgaagcacgtaagctttaagtatccaacgaga
ccagatgttcaaattttaagagacctttgcttgaccatccgcagtggacagacggttgct
ttagttggggagagcggatgtggaaagtctactgtaatatctttgctgcaaaggttttat
gatcccgattcaggccagatttcgttggacggaatagagattcagaagttccaggtaaaa
tggctaaggcagcaaatggggcttgtaagccaagagccagtgttgttcaacgatacaatc
cgagccaatatttcctatggaaaggaaggaaatgcaattgaagcagaagttttagcagca
gctgaattagcaaatgcccacaagttcatcagtagtctgcaacagggttatgatacgata
gtgggagagcgaggaactcagctgtcaggtgggcaaaagcaacgagtggctatagcgagg
gccatattgaaaaatccaaaaatcttactattagatgaggcaacaagcgcattggacgca
gaatcagagagaatagttcaagatacacttgaccgggtggtggtaaatcgtacaactgtg
gtggtagcacatagattatccaccatcaaaggagcagatgtaattgctgtgtttaaaaat
ggagttatcgtggagaaagggaaacacgatactcttatcaatatcaaagatggtttttat
tcctctttggtggccctccacacgagttcttcctag
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integrated database retrieval system
