Solanum dulcamara (climbing nightshade): 129901636
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Entry
129901636 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129901636
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129901636
04121 Ubiquitin system [BR:
sdul04121
]
129901636
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129901636
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129901636
Membrane trafficking [BR:
sdul04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
129901636
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129901636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129901636
NCBI-ProteinID:
XP_055832862
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All DBs
Position
1:10754769..10768134
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AA seq
573 aa
AA seq
DB search
MEIHSSSLVQKFKHGFKSHWVTDHGVQVSLAATLLSIAGGLIFAMKDGGKLRNIMVTSEK
SSSKNHLTIPGLQNLGNNCFLNVVLQALASCKSFSNFLEQVVEECEGSSMEGSEDLPVIA
ALASLVEDLCTARHGRAVLSPRRLMHAMTSHIPNFNLTSQQDAEEALSHLLSSLRAELSE
SYVRDPSSLADVITLPNCRIVTQRMKGESEQERWRQSFLGPFDGILGSFLTCQSCSFQIS
LDFQLFHSLHLVPVSSSSGVIMPGCSVEHCLKQFFVAEQLENYKCSHCWHTAAVMYISAM
DENEAIVEKLKLCNEEDSCDCKQLACLARFPWSNSFSRTFKQLSIGRSPKVLCLHLQRAS
INVFGEQDKLQGHISFPLILDLAPFVKNGVGTKSWEENLHIGQIKHQQQPFPLFNNLNLQ
DNKEMLTCITRSERKISTEVEDTAALCVSDNYDVKAPKSKSSLFEAGGYKEVSLNQLPPH
SGNQGGGSRITPSKSHKYRLASVVQHFGIVGSGHYTVYRRVTAKISEDNPAGLLGSAVDK
WFCISDTDVYSVSERDVLDAEATLLFYEKVSDC
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcactcatcttcacttgtacaaaaattcaaacatgggtttaagtcccattgg
gttactgatcatggggttcaagtttcacttgctgctactttactaagtattgctggtggt
ttaatatttgcaatgaaagatggtggaaaactcagaaacatcatggtgacatcagaaaaa
agtagttcaaaaaatcatttgacaatacctggattgcaaaatcttggtaacaattgcttc
ttgaatgttgttttacaggctttggctagctgtaagagctttagcaattttctcgagcaa
gttgtggaggaatgtgagggttcatcaatggaaggaagtgaagacttgccagtcattgct
gctttggcttcgcttgttgaagatttatgtactgcgcgacatggaagagctgttctaagt
ccaaggagattgatgcatgccatgactagtcacattcctaatttcaatctaactagccag
caggatgcagaggaagcactctcccatcttttatcttctttaagagccgaactgtcagaa
tcttatgttcgtgatcccagctctttggcggatgtaattacacttcctaattgtaggatt
gttacacaaaggatgaaaggagaaagtgaacaggagagatggaggcaaagttttcttggg
ccttttgatgggattcttggtagctttttaacctgccaaagttgttcgtttcagatctct
ctggattttcagttgtttcatagcttgcatcttgtgccagtgtcaagcagcagtggggtt
attatgcctgggtgttccgtggagcattgtctgaagcagttctttgttgccgaacaactt
gaaaactataaatgcagccactgttggcatactgctgccgtaatgtatatctctgccatg
gatgaaaatgaggctattgttgaaaaacttaagctgtgcaacgaggaagattcatgtgat
tgcaaacagctagcgtgccttgcaagatttccatggtcaaatagcttctcacgcactttc
aagcaactcagtattggccggagtcctaaggttctatgtcttcatttacaacgcgcttct
ataaatgtatttggagaacaggacaaacttcagggccatatttcatttccattgattttg
gacttggctcccttcgtgaagaatggagtgggaacaaagagttgggaagagaatctgcac
atcgggcaaataaagcatcagcagcagcctttccctttgttcaataacttaaatctgcaa
gataataaggagatgttgacttgcatcaccagaagtgaaagaaaaatttctacagaagta
gaagatacagctgctttgtgtgtctcagataattatgatgttaaagcaccaaagtcaaaa
tcaagtttgtttgaggctggaggctacaaggaggtcagcttaaatcagctgcctccacat
tctggcaatcagggtggaggttcccggataacaccttccaaaagtcacaagtaccgacta
gcctctgtggtgcaacactttggaatagttggtagcgggcattacaccgtttacagacga
gtgacagccaaaataagtgaagacaatcctgcaggactactgggatctgctgttgataag
tggttttgcatctcagacaccgacgtgtatagtgtttccgagagagatgttctagatgct
gaagcaaccttacttttctatgaaaaagtttctgattgctaa
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