Entry |
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Name |
(RefSeq) uncharacterized protein LOC129901727 isoform X1
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KO |
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Organism |
sdul Solanum dulcamara (climbing nightshade)
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Brite |
KEGG Orthology (KO) [BR:sdul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sdul03400]
129901727
DNA repair and recombination proteins [BR:sdul03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129901727
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:11042113..11091614
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AA seq |
3208 aa
MDFAYGGEDPAILQLQKWGSSRVQANLSDFCEGFISPRRELLLLLSYHCEALLLPLGKSI
KDPQSYKNLQNHDALFSCSLECKLPGKTELGNDCESTSQFIEMEMCNIKTKAVDFTESIS
FPSISDVSTVAWGRCEDLCSQHDNVPFKELLFVLGSEGVTVHAFCQSYMMSELITPTEQD
DVGQGLWVEWGPSTASAQLSGTVCDSTMQSNDSLDVSDMSWSSVTGGRANSCSMESQKEA
SSESFGVKRWFRTYLTKVETMKSDGTVYTKFPDKSSVPSSASVVSFNNFLSCPQLLEFLS
DGCPISHDKQNGNISAEDHADSISTDSIQMSPDALVGQMSSSYKCFRVFSNDAQCLIGFA
LNTKKDVQIESTNIDDGTSCKVLVAVARLINWGMQWVCSVTVGKCLEGRSAIEWPEFRFS
HAFLICLHFSGLVSIYIALTGEHIASLDLLNICEVSPSLVSQEQKNSSSKIRESCIEEKK
CGQLINQAGDFVGRRRFKRLLVISHSLKFCVIDEYGLTYVIHVDDHIPKKYCSLEKLHPQ
QLSDGMLVAWEAGAAEIGYQRVFSNFFGGKEQRKSSIIRESSFVDNTHEERKYGSYGSSL
SDALDVNKNRIFGSRLRSCHSRKVFLAIDESKEDDVVCFSPFGITRLVKGKCSWENGKCR
LVHSSSNVNMTINDDSSYNIQGWDAIVDEAIGCSFQGCLYLVTKDGISVVLPHLSLPSNF
YPVEAIGYRQSCYSAGSKYGVHKLHEFESTKRPFSPWKVEVLDKALLYEGPEVADALCLE
NGWDLSIIWIRNLQLALEYLKFEEIEKSLQMLAHVNLAEEGILRMLLAVVYLMSCKVGND
NEVSAASRLLALGTGFATKMIREYGLLQHKKDGMESWKAGGVQNSFFSSEVMDSRPGWTG
DLERLRKMAHFLEIIRNLQWQLTYKCKRLGQELVDQGEPVGETDLSQDESRILDLPADIL
SLEASNQKGLISASEMERNNGEDLALMPVDAFDCKDISSLDTFKEPYLISEEKRVFSIEN
PKDMIARWEIDNLDVKTVVKDAILSGRLPLAVLKLHLHRSRDLMSDQENQDTFNEVREVG
RAIAYDLFLKGETGLAVATLQRLGEDIETSLKQLVFGTVRRSLRMQIVEVMKGLGYLGPH
EWQILERISLIERVYPCSSFWSTFSCRHKEFKGVSNGNATEEIKLHLLAPLGRDLVIACG
ELDGVVLGSWMNVNEQPIAPETDNDSTHSSYWSAAALWFDVWDQRVVDCIVLDQPSLMGV
NVLWESQLDYHIRHSDWLDVSRLLEAIPSYALTSESLSVSLDVVCSSSVDEYLQKPHDSG
SYIYSLEEVDAVCMNVPSVQIFRFSAHSMCSMWLLMLMERELAKKFIFLKDYWGSTADIV
ALLAQSGFIRDVHKSLLPAEPAESWSKSVLAISDARTHPDSIQAFHKVIVHYCSQHNLLN
FLDLYLDHHKLALDPESVSWMQDATGDNQCAKWLLLQRVKGKEYEASFSNARAVVSHNLV
AGNSFSTMEIDDIIRTVDDIAEGAGEMAALATLMYAPIPIQDCLSSGSVNRLYSSVQCTL
ENLRPFLQRFPTLWRALTAACFGQDPTCSSIGPKPKLFGYSDLLDYLNWRESVFFSSAHD
TSLSQMLPCWFPKAVRRLIQLYVQGPLGWQSIADLPVDDPSLLRDIVPSDISPLSWEVAI
QKHIEEELYDSSLKESRVGIEHHLHRGRALAAFNQLLSNRVQNLKSESSRRQHGTPVQGQ
TNIQSDVQMLLSPITQSEQLFLSSVVPLAIVHFADSVLVASCALLLELCGLSPGTLQIDV
AALRRIASFNKSGPCSNHLQQLSPRGSSFHSNNSDNNITESLARGLADDYCQNDWFNQAI
QKSDQFTTSDRQPSRALMLVLQHLETSSLPSSADGVTCGSWLLTGNGDGVELRSQQKTAS
ENWNLVTTFCQAHQLPVSTRYLALLARDNDWVGFLSEAQIGGYTLEAVMEVASKEFGDAR
LKTHILTILKSSQSRKKFSSSSSSDTGEKKNGTSFPDENVYAPAELFGIIAECERQARPG
EALLLQAKNLCWSLLAAIASCFPDVSPLSCLTVWLEITAARETSAIKVNNAASQTANNVA
AAVEATNSLPASAKAPTVHYNRKNPKRRRLIEPVSVHSLVFTIPDVRKADGNVRIEDMIA
GEECEKQVDQDEKVSNDSGEVTGSLSRMVAVLCEQHLFLPLLRAFEMFLPSCSLLPFIRA
LQAFSQMRLSEASAHLGSFSARIKEEPHVYTQAGNEGKIGSLWISSTAVKAANAMLSRCP
SPYEKRCLLHLLTATDFGDGGSAATCYQRLYFKVNLAEPSLRKNDGLHLGNEPLDDASLL
TALEEHGHWEQARNWAKHLEASGGSWKSATHHVTETQAESMVAEWKEFLWDVPEERAALW
GHCQTLFLRYSFPPLQAGLFFLKHAEAAEKDLPARELHELLLLSLQWLSGMITQCSPVCP
LHLLREIETRAWLLAVESETQVKSEGELTLSSREPASGKGPNIIDRTASIITKMDNHINS
VRIKSGERNDTRESNQSHLKTTQMSDSSSGTILGSAKVKRRSKGFVSSRKSLADPVDRSN
EPETGSINFNVKEDSQVPDENLKIEATFSKWEERVGPAELERAVLSLLEFGQIAASRQLQ
HKLSPGCIPSEFKLVDAALKLAAIATPNNKASILVLDGELRSVMQSYHLFPNQHVIDPLQ
VLESFALLLTEGRGRGLCRRIISVVKAANVLGLAFSEAFEKPPNELLQLLSLKAQDSFEE
AKLLVQSHCMSAASIAQILAESFLKGLLAAHRGGYMESQKEEGPAPLLWRFSDFLKWAGL
CPSEPEVGHALLRLVATCQGIPHACEVELLILSHHFYKSSACLDGVDVLVDLAFKKVEAY
VSEGDFSCLARLITGVGNFHALNFILGILIENGQLDLLLQKFSAAVDANDADEEVRGFRL
AVLTLLKQFNPNDLDAFALVYSHFDMKHEAASLLESRAQQSCKEWSLRSDKDQTDELLAS
MRYFIEAAEVYSSIDAGNKTRQSCAQALLLYLQIRMPDLHFIFLSETNARRALVEQSRFQ
EALIVAEAYGLNQPGEWALVLWNQMLRPELVEQFVAEFVAVLPLQPSMLLELARFYRAEV
AARGDQSQFSVWLTGGGLPAEWAKYLGRSFRCLLRRTRDLRLRYQLATIATGFTDVIDAC
NKAFDKIPDSAGPLVLRKGHGGGYLPLM |
NT seq |
9627 nt +upstreamnt +downstreamnt
atggattttgcctatggtggtgaagatcctgcaatactgcaactgcagaaatgggggtcc
tcgcgagtccaagccaacctgtcagacttttgtgaaggttttatttctccaagacgggag
ttattgttgctactttcatatcattgtgaagctttgctacttccattgggtaaaagtatt
aaggatccacaaagctataagaatctccagaatcatgatgctttgttttcctgttcactg
gagtgcaagttacctggtaaaacagagttggggaatgattgtgagagcacttcacagttc
attgagatggagatgtgtaacataaaaacaaaggcagttgattttactgaatctatctct
ttcccctctatttctgatgtaagcacagtggcttggggtaggtgtgaagatttatgtagt
cagcatgacaatgttcctttcaaagaactgctttttgtgttaggcagtgagggggtaact
gtccatgctttttgtcaatcctatatgatgagcgagttaataacacccacagaacaagat
gatgtaggtcaagggttatgggtggagtgggggccgtcaacagcttcagctcaactatcg
ggaaccgtgtgtgactccaccatgcagtccaatgactctctggatgtcagtgacatgagt
tggtctagtgtaactgggggaagagcgaatagttgttctatggagagtcaaaaggaggcg
tcatctgagagttttggagtgaagagatggtttcgtacttatttgactaaagttgaaaca
atgaagtctgatggaacagtgtatacaaagttcccagataaatcatcagttccttcatct
gcttcagttgtttcatttaataattttctcagttgtccgcagctattggaatttctatct
gatggttgtcctatatcacatgacaaacagaatggtaatatctcagccgaagatcatgca
gacagtatatctacagattccatacagatgtctcctgatgctctagttggtcagatgagc
agttcttacaaatgtttcagagtgttctctaatgatgcgcaatgcttgattgggtttgcc
ttgaatacaaagaaagatgttcaaattgaaagcacaaatatagatgatggaacaagctgt
aaagttttagttgcagtggccaggttaattaattggggaatgcagtgggtttgctcggtg
acagtgggcaaatgcctcgagggcaggtcagcaattgagtggccagagtttagattttct
catgcttttcttatttgtcttcatttttctggcttagtctccatttacattgcattaacc
ggtgaacatatagcatctttagatctgttaaatatttgtgaagtttctccttctttagta
tctcaagaacaaaagaattcatcttcaaagatcagagaaagttgtattgaagagaagaaa
tgtggtcagctcatcaatcaagcgggagattttgttggtagaagaaggttcaaacggctt
cttgtcatttcccattccttaaaattttgtgtgatcgatgaatatggtttaacgtatgta
atacatgtggatgaccatatcccaaagaagtattgttcacttgagaaattacaccctcaa
caattgagtgatggaatgttggttgcttgggaggcaggtgcagctgaaattggctatcaa
agggtcttttccaatttttttggtgggaaggaacaaagaaaatcatccattattagagag
tcttctttcgttgataatacacacgaggaaaggaagtatggctcatatggaagtagccta
tctgatgctcttgatgtaaataagaataggatttttggtagtagattacggtcatgccat
agtagaaaagtttttcttgctatagatgaatctaaagaagatgacgttgtttgtttttct
ccttttgggatcactcggctagtgaagggaaaatgttcttgggaaaatgggaagtgtcga
cttgttcattccagttcaaatgtgaacatgacaataaatgatgacagcagctataacatc
caaggttgggatgccatagtggacgaagctataggttgtagttttcagggttgtttgtat
ttggtcacaaaggacggtatttctgtagttctgcctcatctttctcttccttcaaatttc
tatccggtcgaagcaattggataccggcaatcttgttatagtgctggttcaaagtatgga
gtccataagcttcatgagtttgaaagcacaaaaagacctttttctccatggaaagtggag
gtgttggataaagctctcttgtatgaagggcctgaagtggcagatgcattatgcttagaa
aatggatgggacttgagtattatatggattcggaacttgcagctggcactggaataccta
aaattcgaggagattgaaaagtctttacaaatgcttgctcatgtcaatttggctgaagaa
ggcatcttgaggatgctccttgctgttgtttatctgatgtcctgcaaagttggtaatgat
aacgaggtctctgctgcatcaaggcttcttgctttaggaactggctttgccaccaagatg
atacgagaatatggtttactgcagcataagaaagatggcatggagtcgtggaaagctgga
ggtgtgcaaaattcttttttttcttcagaggtgatggatagtagacctggctggacagga
gatctggaaaggcttcggaagatggctcactttctggagatcatacggaatctgcagtgg
caactcacatacaaatgcaaaaggctaggccaagaattggtggatcaaggtgaacccgta
ggtgagacagatttgtcacaggatgagtccaggattctcgatcttcctgctgatatctta
tctttggaggcttcaaaccaaaaaggtctgatttctgcttctgagatggagagaaataat
ggcgaagaccttgctttgatgcctgtggatgcatttgattgcaaagacatttcttcgttg
gacacttttaaggaaccatatttaatatctgaagaaaaaagagttttttctatagaaaat
ccaaaggatatgattgcacggtgggaaatagataatctggatgtcaaaacagttgtcaaa
gacgctatactttctggtcgtcttcctttggccgttcttaagctgcatcttcatcgttca
agagatttgatgtcagatcaggaaaatcaggatacattcaacgaagttcgtgaagttgga
agagctattgcttatgacttgtttctgaagggtgagactggacttgctgtagcaacactt
caaaggctgggggaagatattgaaaccagccttaaacagttagttttcggtactgtccgg
agatctctacggatgcaaattgttgaagtcatgaaaggacttgggtatcttggtccacat
gagtggcaaattttggagaggatctcactgattgagagggtttatccttgcagcagtttc
tggagtaccttctcttgccggcacaaagagttcaagggagtatcaaatggaaatgcaaca
gaagaaattaaactgcacttattggctccgttaggtagagacctagttattgcctgtggt
gaacttgatggagttgtgttgggttcatggatgaatgtgaacgaacaaccaattgctcct
gaaactgacaatgatagtactcattctagttactggagtgctgccgccttgtggtttgat
gtctgggatcagagagttgttgattgtatagtgctggatcaaccttcccttatgggggtc
aacgttttgtgggagtcacaacttgattaccacattcgccatagtgactggttggatgta
tcaagactcttagaggcaatcccatcatatgcattaaccagtgaaagcctcagtgtcagt
ttggatgttgtatgctcttcatcagttgacgaatatcttcagaaacctcatgactctggc
agttacatatattctcttgaagaggtggatgctgtttgcatgaatgtaccgagtgtccaa
atattcaggttttctgctcacagcatgtgctccatgtggttgctaatgcttatggagcgg
gaacttgctaagaaatttatttttctgaaggattactggggatctactgcagatattgtg
gcgcttcttgcccagtcaggttttattcgtgatgtgcataaatctttactgccggctgag
ccagctgagagctggtcaaaatctgtactagctattagtgatgccagaactcatccagat
tccatccaagcatttcataaggttattgttcactactgctcacagcacaacttgctgaat
ttcctggatctttaccttgaccaccacaaattggctttagatcctgaatcagtttcctgg
atgcaggatgcaacaggagataaccaatgcgccaagtggttgctcttgcaaagggtcaag
gggaaagagtatgaagcgtcattctctaatgcccgtgctgttgtatcacataatttagtt
gctggtaacagtttcagcaccatggagatagacgatataatacgtactgttgatgacatc
gcggaaggagcaggagaaatggcagctttggccacattgatgtatgccccaattccaatt
caagattgcttgagcagtggtagcgtgaacaggctctatagttctgtacagtgtacattg
gagaatcttaggccgtttctccagcgctttcctactttgtggcgtgcactaactgcagca
tgttttggacaagatccaacttgcagcagtataggtcctaaaccgaaattgtttggttat
tctgatttattagactatttgaattggcgtgagagtgtattcttctcttcagcacatgat
acttcactctcacagatgcttccatgctggttccccaaggctgtccggagattaatacag
ctttacgtgcagggcccacttggttggcaatcaattgcagatttgccagtggatgatccc
tctctgctgagggacattgttccttctgacatcagtcccttgtcctgggaagttgccatc
cagaaacacattgaggaggagctgtatgattcttcattaaaggaatctagagttggaatt
gagcaccatttacatcgtggacgtgcattggcagcttttaatcagctgctgtcaaataga
gttcaaaacttgaagtcagaaagttcacgtagacagcatgggactccagtgcaaggacaa
acaaacatccagtcagacgttcagatgcttctttcacctattacacagagcgaacagttg
tttctttcatccgttgtgccccttgctattgtgcattttgctgattcagtgttggtggca
tcgtgtgctcttctattggagttgtgtggtctatctcctggtacactccaaattgatgtt
gcggctttgagaagaatagcttcctttaataaatctggcccttgttccaatcaccttcag
caactttcccccagggggtcttcatttcattcaaataatagtgacaataatattaccgaa
tctctagcacgaggattggcagatgattattgccagaatgattggttcaatcaagctatt
caaaaaagtgatcagttcacaacctctgacagacagccatctcgagctctcatgcttgtc
ctgcaacatttggaaacatcaagtcttccgtcttcagctgatggagtgacgtgtggctct
tggttgttaactggtaacggtgatggagttgaactgaggtctcagcaaaaaactgctagc
gaaaactggaatttggtgacaacattttgtcaggcgcatcaacttcctgtgagcactaga
tatcttgctttattagcaagagacaatgactgggttggttttctctcagaagctcaaatt
ggaggctacaccttggaggcagtcatggaagtagcatcaaaggagtttggtgatgcacgt
ctgaaaacccacatactaacaattttgaagagttcacaatcaaggaagaaatttagctct
tcttcaagttcagatactggggaaaagaagaatgggacatcatttccagatgaaaatgtg
tatgcaccggccgaactatttggaattatcgctgaatgcgagaggcaagcaaggcctgga
gaagctcttctcctgcaagcaaagaatttatgctggtcacttttggctgcaattgcttct
tgttttccagacgtctctccgttgtcttgcctgacagtttggctagaaataactgcagca
agggaaacatcagccatcaaagttaataatgctgcttcccagactgcaaacaatgtcgcg
gctgctgtggaagccacaaattctctacctgcatctgccaaagcacctacagttcattat
aatcgcaaaaacccaaagcgtaggcggctcattgagcctgtgtcagtgcattccttagtt
ttcacaatccctgatgtacggaaggcagatggaaatgtgagaattgaagacatgattgct
ggagaggaatgtgaaaagcaagttgatcaggacgagaaagtttcaaatgactctggtgaa
gtgactggttctttgtctagaatggttgccgtgctttgtgaacaacatttattccttcct
ctgctcagggcttttgaaatgtttcttccttcatgctcgctcttaccttttatccgagct
cttcaggcattttctcaaatgcgcctctctgaagcatcagctcatctgggatccttttct
gctagaattaaggaagaacctcatgtatacacacaagctggaaacgaagggaaaattgga
agtttatggataagttctactgctgtgaaagctgctaatgcgatgctctcaagatgtcct
tcaccttatgaaaaaagatgcttattacacctcctcactgccactgatttcggtgatgga
ggttctgctgcaacatgttatcaacgactctacttcaaagtaaatttggcagaaccttct
cttcgcaaaaatgatggcctacatcttggaaacgagccactagatgatgcttcactttta
acagctttagaggaacatggacactgggaacaggcacgcaattgggctaagcatttagag
gccagtggtgggtcttggaaatctgcaacacaccatgttactgaaacacaggctgagtcc
atggttgcagagtggaaggagtttctttgggatgttccggaagaaagggctgctttatgg
ggtcactgccagactctctttcttagatattcctttccaccattgcaggcgggattattt
ttccttaagcatgctgaggcagcggagaaagatctcccagccagagagcttcatgaacta
ttgttgctttctctacaatggttgagtgggatgattactcaatgcagtccagtttgtccc
ctgcatcttttgagagaaattgaaactagagcatggctattggctgttgaatcagagact
caagtgaaaagcgagggagagcttaccctttctagtcgtgaacctgcaagtggcaagggg
cctaacattattgaccgaactgcaagcattattactaaaatggataaccacattaattca
gtgagaatcaaatctggtgagaggaatgatacaagggaaagtaaccaatcacatctcaag
accactcagatgtcagattctagctcaggtaccattttgggcagtgcaaaagttaaaagg
agatccaaaggctttgtatcatcaagaaagtctttagctgatccagtggacagaagtaat
gagcctgaaactggctccattaattttaatgtgaaggaggattcacaggtacctgatgaa
aaccttaaaatagaagcaactttctcaaagtgggaggaaagagttggacctgcagagcta
gaacgggctgtcctttcacttctggaatttggacaaattgcggcttcccgacagcttcaa
cataaattatctccaggttgcataccatctgaatttaaacttgtggatgctgccctaaag
cttgctgcaattgccaccccaaacaacaaagcatcgatattggtgctcgatggtgaactt
cgttctgttatgcagtcataccatcttttccctaatcaacacgtgattgatcctctccag
gtactggaaagttttgcattactcttaactgaaggtaggggacgtggcctttgcaggcga
ataatatcagttgtgaaggcagcaaatgtgttgggtcttgcattttcagaagcatttgaa
aagcctcctaatgaactcttacaattgctttctctaaaagcacaagattcttttgaagaa
gcaaagctcttagttcaatcacattgtatgtctgcagctagtattgctcaaattcttgct
gaatcatttttgaagggtttgctagcagcacatcgtggaggttacatggaatctcaaaaa
gaggagggacctgctcctttattgtggagattttctgatttcttaaagtgggctgggctt
tgcccctctgaaccagaagttggccatgctttactgcgtttagttgccacttgtcaagga
ataccacatgcctgtgaagttgagcttcttattttgtcgcaccacttctacaagtcctca
gcatgtctcgatggagttgatgttcttgtagatcttgcattcaaaaaggtggaggcttat
gtatctgagggtgatttttcatgtttagctcgcttgataaccggagtggggaacttccat
gcacttaattttattcttggtatccttattgaaaatggtcagctcgatcttcttcttcag
aagttttcagctgctgtcgatgccaacgatgctgacgaggaagtaagaggattcagattg
gctgttctcacattactcaagcaatttaatcccaatgatctcgatgcatttgccttggtt
tatagccattttgatatgaagcatgaggctgcttctcttttggagtcacgagcacagcaa
tcatgtaaggagtggtccctccgttctgacaaggatcaaactgatgagctcttggcttcc
atgcgatacttcattgaagctgctgaagtttactcttcaattgatgctgggaacaaaaca
cgccaaagttgtgcacaggcattacttctctaccttcagattcggatgccagacttacac
tttatctttctgtctgaaactaatgcacggagggcattggtcgaacaatcccgcttccaa
gaagcactaattgttgctgaagcttatggccttaaccagccaggtgaatgggctctagta
ctttggaatcaaatgctaagaccagagcttgtcgaacagtttgtggctgaatttgttgct
gtgctaccccttcaaccctcaatgcttcttgaacttgccagattttacagggctgaagtg
gctgcaagaggggatcagtcacaattttctgtgtggctgactgggggagggctcccggct
gaatgggcaaaatatctcgggagatcattcagatgtttgttgagaaggactagggacttg
aggttgcgataccaactggctaccatcgcaacaggatttaccgatgtgattgacgcgtgc
aataaagcattcgataaaatccctgacagtgctgggcctcttgtcctgagaaaaggtcat
ggaggaggttaccttccactgatgtaa |