Entry |
|
Name |
(RefSeq) N-glycosylase/DNA lyase OGG1
|
KO |
|
Organism |
sdul Solanum dulcamara (climbing nightshade)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:sdul00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129902057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sdul03400]
129902057
Enzymes [BR:sdul01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129902057
DNA repair and recombination proteins [BR:sdul03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129902057
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
9:17762968..17776678
|
AA seq |
378 aa
MQSVRTLPIMKRPITIPSTPPSPQSLPSKTTTLRTLSSKKPRNILTNPIPEEDPKWVPLN
LSRSELYLPLTFPTGQTFRWKQTGPIQYTGVVGRSHLVSLKQLDNGDVGYHFHCATSESA
RDALLDFLNVGISLTEVWESFKASDKRFAELATHLGGARVLRQDPLECLIQFICSSNNNI
KRITMMVDFISSLGNYLGAVGGFKFYEFPSLERLAMVSEQELRAAGFGYRAKYIVGTVET
LKSKPGGGMEWLAVLRKVDLPEAIVSLCSLPGVGPKVAACIALFSLDQHHAIPVDTHVWK
IATRYLLPELAGTSLTPKLHNRVADAFVRTYGKYAGWAQTLLFIAELPSQKSLLNSTEEE
SPNSKKRKLGGITKVPKE |
NT seq |
1137 nt +upstreamnt +downstreamnt
atgcaatcagtgagaactctcccaatcatgaagagaccaataaccattccttcaacccca
ccatctccacaatctcttccttccaagactacaactttgagaaccctctcttccaagaaa
ccaagaaatattctaacaaatccaatcccagaagaagaccccaaatgggtacccctcaac
ttatcaagatcagaactttacttgcccctcaccttcccaacaggccaaaccttcaggtgg
aaacagacaggacccatccagtatactggtgttgttggtaggtcccacttggtctcactg
aagcagcttgacaatggtgatgttgggtaccatttccattgcgctacctctgagtctgct
agggacgcccttcttgattttctcaatgtgggtatttcattaactgaggtttgggagagt
tttaaggcttctgataaaagatttgctgaattggctacccatttggggggtgctagagtc
ctaaggcaagaccctcttgagtgtctcattcagtttatttgctcatctaataacaatatc
aagagaattaccatgatggtcgatttcatttcatcattggggaattatttgggagctgtt
ggaggtttcaagttttatgagtttccttcactggaaaggttggcaatggtttctgaacaa
gagctaagagctgcaggttttggttacagggctaaatatatagttggtactgtggaaaca
ctgaagtcaaagcctggtggaggtatggagtggcttgctgtacttcgcaaagtagatctt
cctgaggccattgtttcgttgtgctctctacctggtgttggtcctaaggtcgcagcatgt
attgctctcttttctctagatcagcaccatgctattcctgttgatactcatgtgtggaag
atcgcgaccaggtacctcctccctgaactggcaggaaccagtcttacgcctaaacttcac
aatcgtgtggcagatgcttttgtgaggacatatggaaaatatgctggttgggctcaaact
ctgcttttcattgcggaactaccttcacagaaatcactgttgaattctacggaagaggag
tctcctaattctaaaaaaagaaaactgggtgggatcacaaaggtccctaaagaatga |