Solanum dulcamara (climbing nightshade): 129902072
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Entry
129902072 CDS
T09577
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129902072
Peptidases and inhibitors [BR:
sdul01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
129902072
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_5
TIP49
RuvB_N
AAA_16
AAA_22
nSTAND3
AAA_25
AAA_17
ABC_tran
ORC-CDC6-like
AAA_28
AAA_2
IstB_IS21
AAA_14
Mg_chelatase
Erp_C
AAA_33
AAA_7
NACHT
AAA_18
Parvo_NS1
bpMoxR
Zeta_toxin
HamA
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
129902072
NCBI-ProteinID:
XP_055833077
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Position
9:complement(73637536..73647646)
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AA seq
714 aa
AA seq
DB search
MALMRLLIQVERQQSQLRQLSSLFNRTYLSSGRIIGSEVHGVANTNQRFQSSYVGSLSRR
VREREETSNAAYHRSDPEAVIRMFESQPSLHSNPAAVSEYVKALVKADRLDESELLRTLQ
RGIAGSARSHMEEENIGALSALRNVGKSTKDGVLGTRNTPIHMVAVEGGNFKEQLWRTFR
SLAVAFLLISGVGALIEDRGISKGIGGLGLNEEVQPSMETNTRFSDVKGVDEAKSELEEI
VHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVG
VGARRVRDLFAAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMRMTLNQLLVELDGFKQNDG
IIVIAATNFAESLDKALVRPGRFDRNIVVPNPDVEGRKQILESHMSKILKADDVDLMIIA
RGTPGFSGADLANLVNIAAVKAAMDGAKAVSLADLEHAKDKIMMGSERKSAFISQESRKL
TAYHEGGHALVAIHTDGALPVHKATIVPRGMALGMVAQLPEKDETSISRKQMLARLDVAM
GGRVAEELIFGESEVTSGPSDDLKQATKLARTMVTKFGMSKEVGLVTHNYDDNGKSMSTE
TRLLIEKEVRELLERAYNNAKTILTTHNKELHALANALLEKETLTGGQIKALLAQVKSQQ
TQQKQHQSVSVESTSQSNPRPPQSPSAAAAAAAAAAAAAATAAAKTKGIAPVGS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggctttaatgcgccttctcattcaggttgaaaggcagcaatctcaactgaggcagctt
agctctttgttcaatcgaacatatctttcctctggacgtatcataggaagcgaagtgcat
ggagttgcaaataccaatcaaaggtttcagtctagttatgtgggaagtctatcccgcaga
gtacgtgaaagagaggaaactagtaatgctgcatatcatagaagtgatccagaagcagtc
ataaggatgtttgaaagccaaccttcattgcattccaatccagcggcagtgtcagagtat
gttaaggcactggtaaaggctgacagacttgatgaaagtgagctgctccggactttgcag
agagggattgctggttctgctaggtctcatatggaggaagagaatataggggctctgtca
gctcttagaaatgttgggaaatcaacaaaggatggtgttcttggtactcgtaatactcct
atacatatggtggccgttgaaggaggtaacttcaaagaacagttgtggcgtacattccgg
tctctggctgtggcctttctcttgatttctggagttggtgctctcattgaagatagagga
atcagcaaaggtataggaggacttggtctaaatgaggaagtgcaaccaagcatggaaacc
aatacaagattttctgatgtgaagggtgttgatgaggcaaaatctgagctggaagaaatt
gttcactatctccgagatcctaagcgtttcactcgtcttggtggcaagctcccaaaagga
gtattacttgttggcccccctggaactggtaagaccatgttggcgagggccatagctgga
gaagctggggttccctttttctcatgcagtggcagtgagtttgaagaaatgtttgtcggc
gtcggagctcggagagtgagagacctttttgctgctgctaagaagcgatcaccatgcatt
atattcattgatgagattgatgccattggaggaagccgtaacccaaaggatcagcaatat
atgaggatgactttaaatcagttgcttgttgagctggatggcttcaaacaaaatgatggt
atcatagtgattgctgccactaatttcgctgagtcactggataaggcattggtgagacct
ggacgatttgatcgcaacattgttgtcccaaatcctgatgtcgaagggcggaagcagatt
ttagaatctcacatgtcaaagattctgaaggcggatgatgttgaccttatgatcattgct
cgggggactcctggattttctggtgcagaccttgcaaacttggtgaatatcgctgccgtg
aaggctgcaatggatggtgccaaagctgtaagcttggctgatctagagcatgctaaggac
aagatcatgatgggaagtgagcgcaaatcagctttcatatcccaagagtcgagaaaactc
acagcataccatgagggtggtcatgcacttgtagctattcatacagatggggctcttcca
gtgcacaaagcaactattgtgccacgaggaatggctcttggtatggttgctcaattgcct
gaaaaggacgagactagcatctctcgtaagcagatgcttgctcgacttgatgttgccatg
ggtgggcgagttgctgaagagctcattttcggggaaagtgaagtaacttctggtccgtct
gatgatctcaagcaagcaaccaagctagccagaaccatggtcaccaagtttggtatgagc
aaagaagtggggctcgttacccacaactacgacgataatgggaagagcatgagcactgag
actaggcttctaattgagaaggaagtaagagaattacttgaaagggcttacaacaatgcg
aaaacaattctcactacccataataaagagcttcatgctcttgctaatgcattgcttgag
aaggagacactaaccggaggccagattaaggccttgcttgcccaggtgaaatctcaacag
acacagcagaagcaacatcaatcagtatcagttgaaagtacatcgcagtccaatccaaga
cctccccagagtccaagtgcagctgcagctgcggccgctgctgcagcagccgctgcagct
actgctgctgccaaaaccaaaggcattgctccagttggatcttag
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