Solanum dulcamara (climbing nightshade): 129902080
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Entry
129902080 CDS
T09577
Name
(RefSeq) cryptochrome-1
KO
K12118
cryptochrome 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
129902080
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
129902080
NCBI-ProteinID:
XP_055833088
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Position
9:complement(9125762..9131105)
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AA seq
679 aa
AA seq
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MAGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLKSLGTSLITKRSTDSVSSLLEVVKSTGATQLFFNHLYDPISLVRDHRTKEIFT
AQGILVRSFNADLLYEPWEVNDDEGRPFTTFSAFWERCLSMPYDPDAPLLPPKRIISGDA
SRCLSDNLVFEDESEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSQNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGQESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLRYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRIDNPQFVGYKCD
PHGEYVRRWLPELARLPTEWIHHPWNAPESVLEAAGIELGSNYPLPIIEIDSAKVRLEQA
LSQMWQNDAAARAAIENGMEEGHGDSADSPIAFPQAMHMEMDHESVRNNPVIVTVRRYED
QMVPSMTSSLFRAEDEENSVDIRNSVVESRAEVPTDINVAEGPRRDTRDQAVMQTARTNA
TPHFNFAVGRRNSEDSTAESSSSTRERDGGVVPTWSPSSTNYSDQYVGDDNGIGTSSSYL
QRHPQSHQLMNWQRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggtggttgtagcatagtatggtttaggagggatctgagagtggaagataac
cctgctttggctgctggagtgagagcaggagcagttattgctgtgtttatttgggctcct
gaagaagaagggcattattatcctggtagagtttcaagatggtggcttaagcagagtttg
gctcatcttgattcatctttgaagagtcttggaacgtcccttattacaaagagatctact
gatagtgtttcttctcttcttgaagttgtcaaatccactggtgctactcagctcttcttc
aatcatttgtatgatcctatttcacttgttagagatcatcgcacaaaagaaatctttaca
gctcaaggtatattggtgcgttcctttaatgctgatttgctctatgaaccatgggaagtt
aacgatgatgaaggtcgcccgttcacaacattttctgctttttgggagagatgccttagc
atgccttatgatccagatgctccacttcttccacctaaaaggattatttctggtgatgca
tcaagatgcctttcagacaacttggtatttgaagatgaatcagagaaaggaagcaatgca
cttcttgctcgggcatggtcacctggctggagtaatgctgataaagcactaactactttc
gttaatggaccattacttgagtactcgcagaaccgtcggaaagctgatagtgcaacaaca
tcctttctgtctccacatttacattttggagaagtcagtgttcgtaaggtattccatctt
gttcgcatcaagcaagttctctgggccaatgaaggaaataaagctggtcaagagagtgtt
aatttgttcctcaagtccattgggctgagggagtactcaagatacatgagttttaatcat
ccttatagccatgaaaggcccttgcttggtcacctaaggtacttcccatgggtagtggat
gagggctactttaaggcatggagacaaggtagaacaggttatcctttggttgatgctggt
atgagagagttatgggcaactggctggctacatgatcgtatccgagttgtggtatctagt
ttctttgtgaaggttctgcagcttccatggaggtggggaatgaaatatttttgggacaca
ttgttagatgcagatcttgagagtgatgctctaggttggcaatatatctctggtacccta
cctgatggtcgtgagcttgatcggattgataatccacagtttgtgggatacaagtgtgac
cctcatggggaatatgtccggcggtggcttcctgaacttgctaggctgcccaccgaatgg
atacaccatccatggaatgcaccagaatctgtacttgaagctgctggcattgagctgggt
tccaattatcctcttccgatcattgaaattgattcagcaaaagttagactagaacaagcc
ttatcacaaatgtggcagaatgatgcagctgcaagagctgcgattgagaatggtatggaa
gaaggacatggtgactctgctgactcgccaatagcctttccgcaggccatgcatatggag
atggaccacgaatcagtcaggaacaaccccgtaatagttactgttcgacgctatgaagat
caaatggtgccaagcatgacgtcatctttgttcagagctgaagatgaagagaactctgtg
gatattaggaattcagttgtggaaagtagggcagaagttccaacagacatcaatgtagct
gaaggtcctaggagagacacgcgtgaccaagccgtcatgcaaacagctcgaaccaatgcc
accccacattttaattttgcggtagggaggaggaattctgaagattcaacagcagaatct
tccagtagtactagagaaagggatgggggtgtagttcctacatggtctccctcaagtact
aactattcagaccaatatgttggtgatgataatggtattgggaccagttcatcttacttg
cagaggcatccacagtctcatcagctaatgaactggcagcggctttcccaaacagggtga
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