Solanum dulcamara (climbing nightshade): 129902086
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Entry
129902086 CDS
T09577
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdul01002
]
129902086
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129902086
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129902086
Peptidases and inhibitors [BR:
sdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129902086
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129902086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
129902086
NCBI-ProteinID:
XP_055833096
LinkDB
All DBs
Position
9:complement(7628638..7637460)
Genome browser
AA seq
1177 aa
AA seq
DB search
MLVGGDLGFISSLVVAAFVAVFGPVLGFVVRRKWRRAVARREEIKRLLVLASEEAARVEL
QATEEYGYVYGYRYDSLKEDDVFVESPASSSPSVPASSLSTTNSTSYSGSRLLQYQCAVC
SSPTSTRCSQCKAVRYCSGKCQILHWRQGHKDECLPVSNLDHLNDVEAKSHLKTYKQEPN
GSHLKSTEVEGRCSSESGDDSPEETALLRSKHLATSDEKHDTVGQSLAETKSPNLNSSFV
FHSSSCEHLDLTTSSGSSVDHSASDSNDSDASDSHRADDIDTFIIQTNHSKVDRFKPSYT
EQPQLVQTADNDSTSGKYNHTNPSIRGDARSKYWTSSTSSSIDGSSESSLTEPSTPSSGF
WEGPVPYTRSRIGSVDSIADPPFRNACDIKISESQSTSRRPPEIARPLISGVGERGSNSK
KNLENPTPIIVEVLKPVNRAESRFEVKDQRESSRSSASRSVTSYKLDVHDSRDKCTLTSE
EGRYSSSSASANLKKHDGLKVSSLPSSSPNNSYRGVEGSTSVLQIPKDRQKESYPVKISD
NISSNSGRHDIQNVKSAKIDSTQVASAYSAESSAPLPNARNGLKSSVLKVVDQLRGSKLT
RLNSPGDECDVNGRYGNKGLFPYESFVKLHNWKNELRPFGLVNCGNSCYANAVLQCLAFT
PPLTSYFLQGLHSKTCEKKGWCFTCEFESLILKAKDGNSPLSPSSIISHLESIGSNLGNG
REEDAHEFLRYVIDTMQSICLKEARVTAPGSFEEETSLIGLTFGGYLRSKIECMRCGGKS
ERQERMMDLTVEIDGDIGTLEEALKQFTHTETLDGENKYRCGRCKSYEKAKKKLKVVEAP
NVLTVALKRFQSGKFGKLNKTIKFPEFLNLAPYMSGTSDKSPVYQLYGVVVHLDVMNAAF
SGHYVCYVRNFHNKWYKVDDSSVKSVELERVLSKGAYMLLYSRCSPRAPRIMRRLTIPPD
PRRSKQLTCKSRSHTRSPWDSSNGDSTSKTCNECSYPSHTSVRPIRSIFEEDSSSEQSSF
FSELGSCSTDSTNRDSTSTDDLNIDIFGDSGVCWNSLWRSSSDSDTSSSSSSPSPLYSRH
SPLADLDRYASAHEDTSCSGNPETGGNGHGFWTGLPDRNGYTGVPETSGRTPPLCPNPSK
HCRKVVSSHSSSKTDSSRLGRVNSCDKSKSPVTCRDR
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgggaggggatctagggtttatctcgagcttagtggtggcggcgtttgtcgcg
gttttcggaccggtgttaggttttgttgttcgaaggaaatggaggcgtgcggtggcaagg
agggaggagatcaagaggctgttggttttagcttcggaggaggcagctagggttgagcta
caagccactgaggaatatgggtacgtttatggatataggtatgattctctgaaggaggat
gacgtgtttgttgaatcaccggcgtcatcatctccatcagtaccggcatcatcgttatca
acaacaaattcaacatcatattctggttcacggctattgcagtaccaatgtgcggtgtgc
tcttctccaacctctactcggtgctcccaatgtaaagcagttcgctactgctctggcaaa
tgtcaaatccttcattggagacaaggtcacaaggatgaatgccttccagttagcaacttg
gatcacctcaatgatgttgaggcgaaatctcatctgaagacatataagcaggaaccaaat
ggaagtcatctgaagagcaccgaggttgaagggagatgttcttcagaatcaggtgatgat
tccccagaagaaactgcacttttgagatccaaacacttggcaacatctgatgaaaagcat
gacacagttggacagagtctggcagaaacaaaaagtcccaatttgaactccagtttcgtg
tttcactcatcttcatgtgaacatttggacctcactacttcaagtggatcttctgttgat
cattctgcatctgattcaaacgactctgatgcttctgacagtcatagggctgatgatatt
gatacatttattattcagactaatcattccaaggtagacagatttaagccatcctacaca
gagcaaccccaactggtacaaactgcagataatgattccacgtctggaaaatataatcac
accaaccctagcattcgtggggatgctcggtctaaatattggacttcatcaacaagttca
agtattgatggctccagtgaatcttcattgacagagccgtctacaccctcatctggtttt
tgggaaggaccagttccttatactagatctaggattggttcagttgatagtattgcagat
cctcctttcagaaatgcttgtgacatcaagatttcagagtctcaatcaacttcacgtcgg
cctcctgaaattgctagaccacttatatctggggtaggcgaacgaggatccaactcaaaa
aagaatctggaaaatccaactccaattatagtggaagtgctgaaaccggtcaatcgagct
gaatcaagatttgaagttaaagatcagagagaaagtagcaggtcatcagcttcgaggtct
gtaacttcgtataagcttgatgtgcatgactcccgtgataaatgcacattgacctctgag
gaaggtagatactcctcatctagtgcttctgctaatttaaagaagcatgatgggttgaaa
gttagtagcttgccatcctcaagccccaacaattcatatcgtggcgttgaaggctcaacc
agtgttctacaaataccaaaagatagacaaaaagaatcttatcctgtcaaaatttctgat
aatatctcttctaacagtgggaggcatgatatccaaaatgtgaagtcagcaaagatcgat
agcactcaagtggctagtgcctattctgcagagtctagtgctcctttaccaaatgcaagg
aatggcttgaagtcatctgttttgaaagttgttgaccagctcaggggttcaaagctgaca
cggctcaattctccaggggatgagtgtgatgtcaacggaagatatggtaacaagggtctt
tttccatatgaaagttttgtgaagcttcataactggaagaacgaattgcggccatttggc
cttgtaaattgtggtaacagctgctacgctaatgctgtccttcagtgcctggcatttaca
ccaccgcttacatcatattttcttcaaggactccactctaagacatgtgaaaagaaagga
tggtgcttcacgtgcgaatttgaaagtttaattctaaaagcgaaagatgggaactctccc
ctatctcctagtagtataatctcccatctcgaaagcattgggagcaatcttggtaatggt
agagaagaagacgctcatgaatttcttaggtatgttatcgacacaatgcaatccatttgc
ttgaaggaagctagggttactgcacctggttcttttgaagaagaaacgagtctcattggg
cttacatttgggggctatcttcgttcaaagattgagtgcatgaggtgcgggggcaaatct
gagaggcaagagagaatgatggatcttactgttgaaatagacggagatataggcaccttg
gaagaagctttaaaacaatttactcatactgagactctcgatggtgaaaacaagtaccga
tgtggcagatgtaaatcgtatgagaaggccaagaaaaagttgaaagtggtggaggctcct
aatgtcctcactgttgcattgaagagatttcagtcaggtaaatttgggaagctaaacaag
acaattaaattcccagagttcttgaacctggcaccgtatatgagtgggacaagtgataag
tcaccagtttaccagctgtatggagtcgtggttcacctggacgtaatgaatgctgcattt
tctggtcactatgtgtgttatgtgagaaactttcacaataagtggtataaagttgatgat
agttcggtaaaatctgtggaacttgaaagagtcttgtcgaagggagcgtacatgcttctt
tattcaaggtgctcgccacgggccccgaggataatgaggagattgactattcctcccgat
ccaaggagatcaaagcaactgacttgtaaatcaagatcccatacaagaagtccatgggac
tcttctaatggtgattcaactagtaaaacttgcaacgaatgttcttatcctagtcataca
agtgtcaggcctattaggtcaatatttgaggaggactcttcgagtgaacagtcatctttc
ttctctgagcttggttcttgcagtacagacagcactaacagggattcaacgagcacagat
gacttaaatattgatatatttggcgactctggggtctgttggaatagcctctggaggagt
tcatctgattctgacacatcctcatcctcatcttctccttcccccttgtactcaaggcat
tcaccccttgctgatttggaccgttatgcttctgcgcatgaagataccagttgcagcggc
aacccagaaacaggtgggaatggtcacggtttttggacggggttacctgatcgtaacggt
tatactggggttccagaaaccagtggaaggacaccacctctctgtcccaacccaagtaag
cattgtagaaaagtagttagtagtcatagtagtagtaagaccgactccagtagattaggt
cgggttaactcttgtgacaagtcgaaatctcctgtaacttgtagagatcgatga
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integrated database retrieval system
