Solanum dulcamara (climbing nightshade): 129902161
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Entry
129902161 CDS
T09577
Name
(RefSeq) zinc finger CCCH domain-containing protein 55
Organism
sdul
Solanum dulcamara (climbing nightshade)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_10
zf-CCCH_2
zf-CCCH_9
SRI
CTD9
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
129902161
NCBI-ProteinID:
XP_055833204
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Position
9:14551523..14560176
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AA seq
851 aa
AA seq
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MGEGAKRRKSLWDAEDESPNIPNYEEWGAPKADNSWQSKSRSGWSSGDNITGTEEPTKEN
YHYKSMSPAFERRGRRSNSHSPDNGRAQSRRYPGRARSRSRSRSRGRGEGKSRSRSRGRD
RFRTSSRSRSRSRSRSRGSMRVQNRSRSPLHNSKRDPYASGDRRTGLHISSQVCRNFAAG
KCRRGSDCRYFHPDAASHRDGGHSEDSLAERLGSRPERGHISRYNDSEGPGYQSRDRLPD
MHHLEDELHRNRSRGTVTCWNFVKGNCRWGASCRFSHDGASGDNYDKGTRSASFDHGQDN
QTSRTGKSLCEYFAAGKCYKDNCKFSHDATSRNHEIRPSDDIGGHRFDDKNNWLNGPKWD
DEGRPSDLVKASGWDESVVRKDTAVTVLTDKTNERPGHSFENENRAWGSTEPQVMNSDRE
RGVSPHRGGAGHLNALNISESSVIHNFTNAQDIHLTSQASDLNMERTSAHVLGHNSNQEA
SGIALSATTTQPYGSAGPFVQPLGLIEDSFARTLGSNAVNDFMNTRDSVHHVRLPGQSFN
GTGGMSSEHSGVLNGTHQEPDVFLPIPSTGHNKREAPGTPEMLEFKVPQNLSGTVTGEQV
HQMETSPTSMIKKFEEGLREAQLQSVLNPSGPSAMLSSNPISSLVHALYSQTNPEMRVPD
NYHPPDGLELNTSGNFKLPPDNSFYLDRDSNKAPMEQMNQSSTVDPELGNNDQIDEVKQQ
ENKLVELNGKDKLAPEESKDVQENDHPGAMNMHGKVEEGSGNKDEKVMRLFKNALIEFVK
EILKPTWKEGKMSREVHKTVVKKVVDKVTSAIQGEQVPKTQEKIEQYLSYSKPKITKLVQ
AYVERFLKNEA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaggtgcaaaaaggcgaaagtctttgtgggatgccgaagatgagagtccaaat
attccgaattatgaggaatggggagctccaaaagccgacaattcatggcagtccaaaagt
agatctggttggtcatctggggacaatattacaggaactgaagagccaacgaaggaaaac
taccattacaagagcatgtctccagcttttgaaaggcggggaaggcgaagcaatagccac
tctccggataatggtcgggcccagtctcgcagataccctggaagagccaggagcaggagc
aggagcaggagccggggaaggggagaaggtaagagcaggagtcgcagtaggggacgggac
aggtttaggaccagcagcagaagcaggagcaggagcaggagcaggagcaggggtagtatg
agagttcagaataggagtcgtagtccactccataattctaaacgtgatccatatgcatca
ggtgatagaagaactggccttcatatatcttcccaggtatgcagaaattttgcagcaggg
aagtgtaggagaggcagtgattgcagatactttcatccagatgctgccagtcatagggat
ggaggtcattcagaggacagcttggcagaaagattgggtagtcgaccagagcgtggacat
atctctaggtataatgatagtgaaggtcctgggtaccaatcaagggacaggcttcctgac
atgcatcatttggaggatgagctgcacagaaaccggagtagaggtacagttacttgttgg
aattttgtgaaaggcaactgtcgctggggtgcatcgtgcagattttctcatgatggtgcc
tcaggtgataactatgacaaaggcactcggagtgcatcctttgatcatggtcaggacaat
caaacaagcagaaccggaaaatcactttgtgagtactttgcagcggggaagtgctataag
gataattgcaaattctctcatgatgccacatcaagaaatcatgaaattaggccctcagat
gacattggtggccataggtttgatgacaagaataactggttaaatggtccaaagtgggat
gatgaaggaaggccctcagaccttgtaaaggctagtgggtgggatgaaagtgttgtgaga
aaagatactgctgtcacagttcttacggataagaccaatgaaagacccggccatagtttc
gaaaatgagaacagagcctggggaagcacagaaccacaagttatgaattctgacagagag
agaggcgtttctcctcacagggggggtgctggtcatcttaatgctttgaacatttcagaa
tcttcagttatacataactttacaaatgctcaagatattcatctcacttcccaagcttct
gatctaaatatggagagaacttcagcacacgtccttggacataattcaaatcaagaagct
tcaggcattgctctatctgccacaaccactcagccttatggatctgctggaccttttgta
cagcctctgggactgatagaagatagctttgccagaacacttggctctaatgcagtaaat
gattttatgaatactagagatagtgttcatcacgtccgtttgcctggccagagcttcaat
ggaacaggtggtatgagctctgaacattctggagttctgaatggaacacaccaagaacca
gatgtattcttacctatcccatcaactggccacaacaagagagaagcacctggcacaccc
gagatgctggaattcaaagtccctcaaaatctttccggtactgttactggtgagcaagta
caccaaatggaaacctctccaacgtctatgataaagaaatttgaggaaggactgcgagaa
gcccaactacaaagtgtcttaaatccctctggtccttcagcaatgctatcttcaaatccc
atttcttcacttgttcatgctctatatagtcagaccaatcctgagatgagggttccagat
aactaccatcccccagatggcttagagttgaatacatctggcaactttaagttgccccct
gacaattcgttctatttggatagagatagtaataaggctcccatggagcaaatgaatcaa
tcatctactgttgatcctgaacttggaaataatgatcaaattgatgaagtgaagcagcag
gagaataaattagttgaactcaacggaaaagataaattagctcccgaggagtccaaggat
gtgcaagaaaatgatcatccaggagctatgaatatgcatggaaaggttgaggagggaagc
ggtaacaaagatgaaaaggtgatgcggttattcaaaaatgctctgatagagtttgttaag
gagatcctaaaacccacatggaaagaaggtaagatgagcagagaagttcataaaacagtt
gttaagaaggtggttgataaggtgaccagtgcaattcaaggagaacaagtccctaagacg
caagagaaaatagagcaatatctgtcctattcaaagcctaaaattaccaaacttgtacag
gcatatgtggagcgatttctgaagaatgaagcttga
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