Solanum dulcamara (climbing nightshade): 129902230
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Entry
129902230 CDS
T09577
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1 isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129902230
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129902230
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
129902230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_UBOX
RING_XB3-XBAT31
Prok-RING_4
zf-rbx1
DUF1450
zf-ANAPC11
zf-C3HC4_5
Rad50_zn_hook
KIP1
Motif
Other DBs
NCBI-GeneID:
129902230
NCBI-ProteinID:
XP_055833319
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All DBs
Position
9:20620354..20646590
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AA seq
828 aa
AA seq
DB search
MESLLPLDTAVLLHQNQKLSQKLEAQKIEIVVLEEKITELRDKQKPYDNTLAVIQKSWEE
LVDELEVCSMHTKDPLRHGNASNHQSYAEVKESSSAVNSQTEYEHKKMDDQNIMKIFRNI
VSTVDDICQMKDKLCAAVLEVLPEDGSCFQKSSSDLHIGVKNLIQTINELHLKHQSLAVA
LQNHRDTDAKNKAELKCLRGELEKTIAHLDESNRKLAILKAEKDAAKGVLFPVLNLGNKH
SANDKARDKQRDMQDMESALKEYLDQSSFRLFELKRLHEERIDILKQLSNLQNKLKNVKA
ICSSQPYALVKDQLAKAKEDASLYQSLYEKLQVEKDNLSWREKEMTLKNDIIDVFRRSSA
IADSRIAWLEKEMQKHMQERNMIEAKLEEASREPGRKEIIAEFKKLVSSFPETMGNMQNE
LSNYKETTSDVHSLRADVQSLSSILDRKSKEIEMLSAKSASQVAEMLKLQAMVNDLKESD
MQLKLILEMYKRESAFSRDVFEARGSEYRAWACVQSLKTSLDEHNLEVRVKSAIEAEANS
QQKLAASETEIAELRQKLDASKRQRSRLSEVLKSKNEETEAYLSEIETIGQAYDDMQAQN
QQLFQQITERDDYNIKLVLEGIRARQQRDCLTWECQTTERAVEDANTMASSYELKAAKID
DQLRGCSDLVQKLAEERAQNSLALENTQKRLLDVTKSSQHLGETLEESQSKIDTSRVDLA
QMQIELEKERFERKRAEEDVEALRRKTLRLRSHIEGSSVIEKLQQKLREYKEILNCSICF
DRRKEVVLAKCYHLFCNPCIQKIVETRHRKCPVCSASFGANDVKAVYI
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcttgctaccgctcgacactgcggttctgctacatcaaaaccaaaaactctct
caaaagctagaagctcagaagattgagattgtggttcttgaagaaaaaatcactgaattg
agggataaacagaagccatatgataacaccctagctgttattcagaaatcatgggaagag
ttggttgatgaattggaagtatgttccatgcacacaaaggatccgttaagacatggaaat
gcaagtaatcatcagtcttatgcagaagtaaaagaaagcagctctgctgttaactctcaa
acggaatatgaacacaagaaaatggatgatcaaaacatcatgaaaatattccggaatata
gtatccactgtagatgacatttgccaaatgaaggacaagttgtgtgctgcagttctcgag
gtgcttcctgaagatggatcatgcttccaaaagtcatcgagtgatttgcatataggagtt
aaaaatcttatacagacgataaatgaacttcatttgaagcatcaatccctggctgttgca
ttgcagaatcatagagatactgatgctaagaataaagctgagcttaagtgtttaagaggt
gagttggagaaaaccattgcacatttggatgaaagtaacagaaaattggcaattctaaaa
gcagagaaagatgctgccaagggggtcctcttccctgtcttgaatcttggaaataagcac
tctgctaatgataaggcgagagataagcagagagacatgcaggatatggagtccgcactt
aaggagtatttggaccaatcctctttccgtttgttcgaactcaagcgtcttcatgaagaa
aggatagacatattgaagcagttgtctaacttacagaacaaactaaagaatgtgaaagcc
atatgctcttcccaaccatatgccttggttaaagatcaacttgcgaaagctaaagaagat
gcatctctgtatcagtccttatatgagaaactacaggtggagaaagacaatctttcgtgg
agggaaaaagaaatgactttgaagaatgatataattgatgtttttcggcgatcttccgcc
atagctgattctagaatagcctggctagaaaaggagatgcagaaacacatgcaagaaaga
aatatgattgaggccaagctggaagaagcatcaagagaacctggtaggaaagaaattatt
gcagaatttaaaaaattggtttcttcattccctgaaacaatgggcaatatgcagaatgaa
ctaagtaactataaggagactacttcagatgttcattcactacgagcagatgttcagtca
ctttccagtattcttgaccggaagtcaaaagagatagaaatgttgtctgccaagtcagct
tcccaggtggccgaaatgctgaagttgcaagctatggttaatgatttgaaagagagtgat
atgcagttaaagctcattttggaaatgtataagcgtgaatctgctttctcaagggatgtt
tttgaggctcggggttccgagtacagagcttgggcctgtgttcagagtctgaagacttct
cttgatgaacacaatttggaagtgagagtgaaatctgctattgaagctgaggcaaactcc
cagcagaagctagctgcttcagaaactgagattgctgagctgagacagaagttggatgct
tctaaaaggcaacggtctagactctcggaagtgttgaagtccaagaatgaagaaaccgag
gcctacctctctgagattgagacaattgggcaggcctacgatgatatgcaagctcaaaat
cagcagctcttccagcaaatcacagagagagatgattacaatataaagcttgttttagag
ggaatacgggcaagacaacagcgggattgtttgacctgggaatgtcaaaccacagagcga
gcagttgaagatgccaacacaatggccagttcctatgaattgaaagctgctaaaattgat
gaccagttgaggggatgctcagacttggtccagaaacttgctgaagaaagggctcagaat
tctcttgctttggagaacacccaaaaacggttgttagatgtaacaaaatcttcccagcat
ttgggggagacgctggaagaatcgcaatccaagatcgatacaagtcgagttgatcttgca
cagatgcagatagaactagagaaagaaaggtttgagagaaaaagagcagaggaggatgta
gaagctctgaggagaaagactttacgtttgagatcacacatcgaagggtcatctgttatt
gagaagcttcagcagaaactaagggaatacaaggaaatactcaattgtagtatttgcttt
gataggcgaaaagaggttgtccttgcgaaatgttaccatctcttttgtaatccgtgtatc
caaaaaattgtagagactcgtcaccgcaaatgccctgtctgctctgcaagttttggagca
aatgatgtgaaggctgtttatatctga
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