KEGG   Solanum dulcamara (climbing nightshade): 129902237
Entry
129902237         CDS       T09577                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129902237
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    129902237
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD zf-C3HC4_4 RING_XB3-XBAT31 Prok-RING_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 129902237
NCBI-ProteinID: XP_055833348
LinkDB
Position
9:75640551..75655258
AA seq 1065 aa
MAGNKVTEELVSMVRSIVGDEYTEMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTH
FNSEAENVRSNSGKIKESVISTVSSIVGLDTESEFGDNGLVGKRAGCDMGSEYGSNGLVG
KRAGCDMGRECGSNELVGKRAGCDMGSEWWYVGCGEVAGMSTCKGRILKPGDEVDFTFPV
EKKLSSPSRGKFGSGRGRQAAACSEIVRFSTMACGEIGRIPNEWARCILPLVRDKKIRIE
GCCKSAPNILGIMDSVLLSVRVHINSSMFRKSHQTSLKARSNPADDTVVHPLPTLFYLLG
LTPFKKAEFTPADLYTRKRPLNEQESSGGPASLLRANLSKSSSSADGDKVENDESISDTD
LDYIVGLADSSKLQEMEPPSTLQCELRPYQKQALHWMTQLERGRNTDEAATTLHPCWNAY
RLKDERELVVYLNAFSGDATTEFPSTLETARGGILADSMGLGKTIMTISLLLSHSERGGS
SGSQSTSQLSSENGEASNILGHSPTFAKKAKFSSLDKLMKHKPILISGGNLIICPMTLLG
QWKAEIEAHAQAGALSVYVYYGQTRSKDAKVLARSDVVLTTYGVLASEFSTENAEDSGGL
LSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVE
PWGSWAWWNKLIQKPFEEGDESGLKLVQSILSLIMLRRTKSSTDREGRPILVLPPADIQV
MYCELTEAERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSR
GDAQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRNGEQGECPICLEAFEDA
VFTPCAHRLCRECLLASWRSSNSGLCPVCRNTVSRQELITAPSDNRFQFDVEKNWVESSK
VSALLSELKRVHSVGSKSIVFSQWTAFLDLLQIPLSRSSIPFVRLDGTLNQQQREKVIKK
FSEEDDISVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQTKQVMIK
RFIVKGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggcggggaacaaagtcactgaggagcttgtttcaatggtacgttccattgttggcgat
gaatatacagagatggacataattagatcacttcacatggcgaaaaacgatcctacagct
gcaataaacatcatttttgacaccccgagtttcaagaaaatcgaaattcgcaatacccat
ttcaattctgaagctgaaaatgtacgtagtaatagtggtaagatcaaagaatctgtgatt
agtacagtttcttcaattgtgggtttggatactgaaagtgaatttggggataatgggttg
gtgggtaagagggctggatgtgatatgggtagtgaatatgggagtaatgggttggtgggt
aagagggctgggtgtgatatggggagggaatgtgggagtaatgaattggtgggtaagagg
gctgggtgtgatatggggagtgaatggtggtatgtggggtgtggtgaggttgctggtatg
tcaacttgtaaagggaggattttgaagcctggtgatgaagttgattttacattcccggtg
gagaagaaattgagttcaccttcacgtgggaagtttggcagtggacgagggcgtcaagca
gctgcctgttctgaaattgtaaggttttctacaatggcttgtggagagattgggcgtatt
ccaaatgaatgggctcgatgtattctgccactggtgagagataagaagattagaattgaa
gggtgttgcaaatcggcccctaatatattggggattatggactctgtccttttgtctgtc
agagtgcatattaacagttccatgtttcgtaaaagccatcagacatcactaaaggctaga
agcaatcccgcagatgatacagttgttcacccccttccgactttgttctatttgctcggg
cttactccatttaagaaggcagagtttactccagctgatttatacacgaggaagcggcct
ttgaacgaacaggaaagctctggaggtcctgcctcattattgcgtgcaaacttgtccaaa
agctcctcatctgcagatggagataaagttgagaatgatgagtcaatttctgatactgat
cttgactatattgttggtttagctgatagctcaaagctacaggaaatggaaccaccaagt
acgctccagtgcgaactgcgaccctatcagaagcaggcgcttcattggatgacgcaactg
gagaggggaagaaacacagatgaagcagcaactactctgcatccatgttggaatgcttac
cgcctgaaagatgagagggagcttgttgtttacttgaatgcattttcgggcgatgcgacc
actgaatttccaagtacccttgaaacggctagaggagggattttggcagattccatgggg
ctagggaagactataatgactatatctctcctcctcagtcattctgaaagaggtggatca
tcaggaagccaatctacaagtcagctgtctagtgaaaatggtgaagctagtaatatctta
ggtcattctccaacttttgcgaagaaagcaaaattctctagtcttgataagcttatgaaa
cataagccgatactcatttctggtggcaatctgattatatgtccaatgacactactaggt
caatggaaggcagagattgaggcccatgcacaagctggggctctatctgtgtatgtttac
tatgggcagacaagatcaaaggatgcaaaagtgcttgcccgaagtgatgttgtgctaacg
acatatggggtgttggcctccgaattttctactgagaatgctgaggacagtgggggcctt
ctctctattagatggtttagagtggtgcttgatgaggcgcatactatcaaatcctctaaa
agccaaatctcaaatgctgccgctgctcttattgctgaccgtcggtggtgtcttactggt
acccctatccagaacaatctggaggatatttacagtctactaagatttttgagagtcgaa
ccatggggaagctgggcatggtggaacaagcttattcagaaaccttttgaggagggagat
gagagcgggctaaagttggttcaatcaatattaagtctgattatgttgagaagaacaaaa
tctagtacagatagagaaggaagaccaattttagttctaccaccagcagatattcaagtg
atgtattgtgaacttacagaagcagagcgcgacttctatgatgcattgtataaaagatcc
aaggtgaagtttgatcagtttgttgagcaaggacgggttctccacaactatgcttctata
ttggagttgcttttgcgacttcgtcaatgttgtgaccatccgtttcttgtcatgagtcga
ggtgatgctcaagaattctctgatctaaataagcttgctaaacgtttcctcaagggtggt
aaggagactggagaaggaaaggatgtcccttcacgtgcttatattcaggaggttgtggaa
gagttgcggaatggagaacagggagaatgccctatttgtcttgaagcttttgaagatgcg
gtgtttactccatgtgctcataggttatgtcgagagtgtctcttggcaagctggcgaagt
tctaattcaggcctttgtcctgtttgtagaaacactgtcagtagacaggagcttataaca
gccccgtcagacaaccgctttcagtttgatgttgaaaagaattgggtggagtcatcaaaa
gtatcagccttgttgtctgaattaaaacgtgttcattctgttggctccaaaagcattgtt
tttagtcagtggactgccttcttagatctactgcagattcctctttctcgtagtagtatt
ccatttgttcgccttgatgggacgttaaaccaacaacaacgtgagaaagtaataaagaag
ttctcagaagaggatgacatatcggtgttgctaatgtcattgaaggctggtggtgttggg
ataaacctgacggctgcatctaatgcatttgtcatggatccttggtggaatccagctgtt
gaggaacaagcggtcatgcgtgttcatcgtattggacaaactaagcaagtaatgatcaaa
cgattcattgtgaagggttcggtagaggaaagaatggaggcagtccaagctaggaagcaa
cggatgatttctggtgctttgaccgaccaagaagttcggactgcaagaattgaggaactt
aagatgcttttcgcatag

DBGET integrated database retrieval system