KEGG   Solanum dulcamara (climbing nightshade): 129902239
Entry
129902239         CDS       T09577                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129902239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sdul03041]
    129902239
Spliceosome [BR:sdul03041]
 Complex A
  U2 snRNP components
   U2 related factors
    129902239
 Complex B
    129902239
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 HATPase_c Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 129902239
NCBI-ProteinID: XP_055833356
LinkDB
Position
9:75706628..75711774
AA seq 309 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDSITP
GVDAQGQPIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQFREEE
QAANALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
RRQLFGRYRRRHSRSRSRSPYRHRSHEERSHRSHSRKYDERDHYYESRSRRNRSTSPEHR
RGRSRSPGSRRDRSPVRDGSEERRARIEQWNREKEQAELANRTNADSNYKNESNENGSAQ
NQDQYYNQQ
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcagagcacttagcttcaattttcggtactgaaaaagatagagtgaattgccctttc
tatttcaagatcggtgcttgtagacatggcgatcgatgttcgaggcttcatacgaaaccc
agtattagtcctactattctcctttcaaatatgtatcaaagacctgattcaattacacct
ggtgttgatgctcaaggacaacccattgatcctcgcaaaatccaggaacattttgaggat
ttttatgaagacttgtttgaagaactgaacaagtatggagagattgagagcctgaatatt
tgtgacaatctggctgatcacatggttggtaatgtttatgttcagtttagagaggaagaa
caggctgcaaatgcactgaagaatcttactgggagattctatgccggaaggcccatcatt
gttgatttctctcctgtgactgattttcgtgaagccacctgtcgacagtacgaggaaaat
gtctgcaaccgcggtggatactgcaactttatgcacctcaaaaagatcagcagggaattg
cgacgtcagttgtttggaaggtatagaaggcggcatagcagaagcaggagccgaagtcct
tataggcatcgcagccatgaagagcgctctcacaggagtcatagtagaaagtatgatgaa
agggatcattattatgagagtcggagcaggaggaatcgaagtacaagccctgaacacagg
aggggtaggagcaggagtcctggtagcaggagagaccgaagtccagttagggatggcagt
gaagagaggcgtgcaagaatagagcagtggaaccgggaaaaagaacaggcagaacttgct
aataggactaatgcagacagtaattacaaaaatgaaagcaatgagaatggatctgctcaa
aaccaagatcagtattataatcagcaatga

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