Solanum dulcamara (climbing nightshade): 129902278
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Entry
129902278 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129902278
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129902278
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129902278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
129902278
NCBI-ProteinID:
XP_055833413
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All DBs
Position
9:27379990..27390763
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AA seq
827 aa
AA seq
DB search
MGKVKGKHRLDKYYHLAKEQGYRSRAAWKLIQLDSKFSFLRSSQSVLDLCAAPGGWMQVA
VKHVPVGSLVIGVDLDPIRPIRGAISVQQDITTPKCRSTIKKLMAENGCRAFDLVLHDGS
PNVGGAWAKEATSQNSLVIDSVKLATELLAPKGTFITKIFRSQDYNAVLYCLRQLFEKVE
VDKPLASRSASAEIYIIGFKYKAPSKIDPRLLDVKHLFQGGKEPPKVIDVLGGTKQKRHR
DGYEDGATVLRKVCSVAYFVWSDNPVQVLGSFTSMSFDDPACLAIRDHTLTTEEVKSLCD
DLRVLAKQDFKCLLKWRMQIRKALSPEKIKTPTVVESESKDDEDEDEDERVLNEIEEKTN
ILEKKQKKEKKLQAKRRAKEKARKALGIQVDVTEDGYGDQDLFSLSSIKGKKDLLAVDNS
EYDKETTEVSDESDEEAQEHSSSDLDSEDERRRHDNNIEALFDEAYERYLGRVEGKSKQR
KRSKQAHLKDDQLLQDGNDDSTMIHSAQDSESDMEDNEVNPLVVPLEDEPPQEEIVKKWF
TQDVFAEAEEQDVLDKYDSEDEMKIDGGAKKIPKSKELTNDKQQGETKDLTRKTNGGLQV
SASKTDDDFEIVPAPATDSSDSSSDDDIDTKAEILATAKMMLRKRPREEMIDDAYNRYMF
HDEGLPKWFIDEEKRNYQPVKPVTKEEIAAMRAQFKAIDARPAKKVAEAKARKKRAAHRK
LEKFRKKANSISDQTEISEGSKRKMIEQLYRKAATTKKPEREYVVAKKGVQVKVGKGKVL
VDPRMKKDARKHGMKKKKQQDKGKKGNQKGKGSGKALAAGNKGNRRK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtgaaaggaaagcatcgtttggacaagtactatcatcttgccaaagaacaa
ggttatcgttctagggcagcatggaagcttattcaactcgattccaagttcagctttcta
cgttcatctcaatcagtacttgatctttgtgcagcacctggtggttggatgcaagtcgct
gttaagcatgtacccgttggtagtcttgttatcggtgttgatttggatcccattaggcca
attcgaggtgctatttctgttcaacaggatatcaccacacctaaatgtcgttcaactatt
aagaaacttatggctgaaaatggatgtagagcttttgatttggttcttcatgatggttcc
cctaatgttggtggtgcttgggctaaggaagctactagtcagaattcattggttattgat
tctgttaagcttgctactgaattgttggctccaaaagggacttttattacaaagattttc
agatctcaagattataatgcagttctttactgtctaagacagctttttgaaaaagttgag
gtggacaaacctctggccagtcgttcagcatctgctgaaatttatattataggttttaaa
tataaagctccttcaaagatcgatccacgacttcttgatgtaaagcacctctttcaagga
ggaaaggaaccccccaaggtgattgatgtactcggggggacgaagcagaagagacaccgt
gatgggtatgaagatggagccacagtcctaaggaaggtgtgctcagttgcatattttgta
tggtcggataaccctgttcaggtccttggttcatttacttcaatgagctttgatgatcct
gcatgtttggctattagagatcacactcttacaacagaggaggttaaatctctatgtgat
gatttgcgtgttcttgcaaagcaagacttcaagtgtctcttaaagtggcgtatgcagata
agaaaagctttatctcctgaaaaaataaagaccccaacagttgttgaaagtgagagcaaa
gacgatgaagatgaagatgaagatgaaagagttctcaacgaaatagaggagaaaaccaat
attttggagaaaaagcagaaaaaagagaagaaacttcaagcaaaaagacgagccaaggag
aaagcacgcaaggcacttgggatacaagtagatgtgacagaggatggttatggtgatcag
gatttgttctctctatcttccatcaagggcaagaaagatcttttagctgttgataacagt
gaatacgacaaagaaactactgaggtaagcgatgaaagtgatgaggaagcccaggagcat
tcatccagtgatctggactctgaagacgaacgcagaagacatgataataatatagaggca
ttgtttgatgaggcttatgaacggtatttgggtagagtggaaggtaaatcaaaacagaga
aaacgatccaaacaagcacacttgaaggatgatcaactcctgcaggatggcaatgatgat
agcacgatgattcattctgctcaagactctgagagtgacatggaagataatgaagtcaac
cctctcgttgtaccccttgaggatgaaccacctcaggaggagattgtgaagaaatggttt
actcaagatgtttttgctgaagcagaagagcaagatgtcttggacaagtatgacagtgaa
gatgaaatgaaaatagatggaggggctaagaagatcccaaaatctaaggaactgacaaat
gataaacagcagggagaaactaaggatctgacaaggaaaacaaatggtggtttacaggtc
tcagcttctaagacagatgatgattttgagattgttcctgctcctgctactgattctagt
gactcatcatctgatgacgatattgacaccaaggctgaaatattggctacagcaaagatg
atgctgaggaaaaggccgagggaagaaatgattgatgatgcttacaacagatatatgttt
cacgatgagggattgccgaagtggttcattgacgaggaaaaaagaaattaccagccagtg
aaacccgtgacaaaggaggagattgctgcaatgagagctcaatttaaagcaattgatgct
cggcctgcaaagaaggttgcagaagccaaagctcgtaagaaacgggcagcacatagaaag
ctagagaagtttaggaagaaagctaactcaatatctgaccaaactgaaatctctgaaggt
tcaaagagaaaaatgattgaacagctatacaggaaggcggcaacaacaaaaaaaccagaa
agggaatatgtagtggcaaagaagggagttcaagttaaggttggcaagggaaaagtcctt
gtcgatccaagaatgaaaaaagatgcaagaaagcatggaatgaaaaagaagaagcagcag
gacaaggggaagaagggcaaccaaaaaggaaaaggctcaggaaaggctttagcagcaggc
aacaagggaaaccggagaaaatga
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