Solanum dulcamara (climbing nightshade): 129902324
Help
Entry
129902324 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129902324
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129902324
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129902324
Ubiquitin system [BR:
sdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
129902324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
129902324
NCBI-ProteinID:
XP_055833500
LinkDB
All DBs
Position
9:13061912..13072316
Genome browser
AA seq
649 aa
AA seq
DB search
MADQEDEELKMALRMSMQKESPEPKRSKPGEEVSVAGGGGGEEGESPEVKNRRRQRELMA
AAAEKRMMALPKNVVVEKSGGSGSGVVVEKSGGSGSGVVVEKSGGSGSGVMECKGKSVNL
GKGEDKNVMVKGEEKNVNLGEELSIAEANELFSMIFGCEVTRDILGQWTNQGIRFSPDPD
TSMGLVQHEGGPCGVLAAIQAFVLKYLLFFSDDLNMVSPSLSGHVGLRRLANKESAGADI
FSSLSEETKSRALIRGMCEILFMCGSNRRVVIASLRTLDANLEGSQGRSGDEVISKALEG
ISIESGANLQKVLIINTYTSSEDALQRLQALLPVFRSRMGAMLFLISSLLSHGMDSVQAD
RDDPSQPLVTAPFGHASQEIVNLLLSGEAVANVFDGRMDLGGGMFVKGISTTVEVGFITL
LESLNFCKVGLHLKCPTWPIWVVGSESHYTVLFALDTKVQEENELEGKETKIRRAFDAQD
QSGGGGFISVEGFHQVLRETNVNLPADKLQNLCSSGYIVWSEFWQVLLDLDKSLGGLKDP
SGLMGKKVFDLYHFNGIAKSVMNGNQVSSGNDIPVQRPRLTKLRVSVPPRWTPEEFMSSG
PSTSDPAGKDCVTEVSKPEPSQHAPLVDCIRTRWARATCTWEGDPPSIV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagaagatgaagagttgaaaatggcgttaaggatgagtatgcagaaggag
tcgccagagcccaagaggagcaaaccgggagaggaggtctccgttgccggtggcggtggt
ggggaggaaggggaatcgcctgaggtgaaaaacaggagacgtcagagggaattgatggct
gctgctgctgaaaagcggatgatggcgttgcccaagaatgtggtggtggagaagagtggt
gggtctggcagtggagtggtagtggagaagagtggtgggtctggcagtggagtggtagtg
gagaagagtggtgggtctggcagtggagtgatggaatgtaagggtaaaagtgtgaatttg
gggaagggtgaagataaaaatgtgatggtgaagggtgaggagaaaaatgtgaacttgggg
gaagagctttccattgcagaggctaatgaattgttttcaatgatctttggttgtgaagtt
accagagatattcttggtcagtggactaatcagggcataaggtttagtccggatccagat
acatctatgggtttagtgcagcatgaaggtgggccctgtggtgtgctagcagcaatacag
gcttttgttctgaagtacctattgtttttctcggatgatttaaatatggtttcacctagc
ttgtctggccatgtgggtttgagaagattggctaataaagaatctgctggagctgatatt
ttttcgtctctaagtgaagagacaaaatcaagagcattgataagaggcatgtgtgagata
ttgtttatgtgtggaagcaatagacgggttgtgatagcatctttgagaacacttgatgct
aaccttgaggggtctcaggggcgttcaggtgatgaggtcatttctaaagcacttgaaggt
atctcaattgagtccggggctaacttgcaaaaggttttaatcattaacacgtatacttcg
tcagaggatgcccttcaaaggcttcaagcactgctcccagtattccgaagtcgtatggga
gcaatgctgttcctaatatcttctttgctttctcatggaatggactctgttcaagctgat
agggatgatccttctcaacctttggttacagcaccttttggacatgcttcgcaggaaatt
gtgaacctgttgctttctggggaagctgttgccaatgtgtttgatgggaggatggatttg
ggtggtggcatgtttgtgaagggtatctccacaacggttgaagttggatttattactctg
ctggagtccctaaacttctgtaaagttggcctgcatttgaaatgcccgacatggccaata
tgggttgttggcagtgaatctcattacacagtcttatttgctctcgatacaaaagttcag
gaggagaatgaacttgaaggcaaggaaacaaagatccgtagagcttttgatgcacaagat
cagagtggaggtggtggattcattagtgtagaaggttttcatcaagtccttagggagact
aatgtcaatcttccagctgacaagcttcaaaatctctgcagtagtggatacattgtatgg
agtgaattctggcaggtcctgttggacttggacaagagtttgggagggctgaaagatcct
agtggattaatggggaaaaaggtctttgatctataccactttaatgggattgcaaaatca
gttatgaacggaaaccaggtttcatctggaaatgatattccggtacaaaggcctagactc
accaagctgagagtttcagttcccccaaggtggacgccagaggagtttatgtcttcaggc
ccaagtacaagtgatcctgccggtaaggattgtgtcactgaagtttcaaaaccagaacct
tctcagcatgctcctttagttgactgcatccggacacgctgggcccgagccacatgtact
tgggaaggtgatccaccaagcatagtttga
DBGET
integrated database retrieval system
