Solanum dulcamara (climbing nightshade): 129902365
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Entry
129902365 CDS
T09577
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129902365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129902365
03009 Ribosome biogenesis [BR:
sdul03009
]
129902365
04131 Membrane trafficking [BR:
sdul04131
]
129902365
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129902365
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129902365
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129902365
Membrane trafficking [BR:
sdul04131
]
SNARE
SNARE associated proteins
Others
129902365
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129902365
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129902365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_18
AAA_28
Mg_chelatase
Parvo_NS1
ATPase_2
Viral_helicase1
Vps4_C
IstB_IS21
ABC_tran
NACHT
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
129902365
NCBI-ProteinID:
XP_055833569
LinkDB
All DBs
Position
9:73790423..73796085
Genome browser
AA seq
805 aa
AA seq
DB search
MAHQAESSDSKNAKKDFSTAILERKKAANRLIVDETVNDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
QDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKHTQGFSGADITEICQRACKYAIRENIEKDIEREKRRQEN
PDSMDEDVDEVPEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAEA
SGGGTAAADPFATSNAAADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccaggccgagtcatctgactcaaaaaatgctaagaaggacttttctacggcg
attttggagcggaagaaagctgcgaataggcttattgtagatgaaacggttaacgatgat
aactccgttgtcgctttacatcctgctactatggagaaacttcagcttttccgcggagat
acaattctcatcaagggaaagaagagaaaggatacagttgtcattgcccttgctgatgaa
acatgtgatgagccaaagattaggatgaacaaggtagtccgttcaaatttgagggttcgt
ctcggagatgttgtatccgtgcaccagtgtccagatgtcaagtatgggaagcgtgtccac
atacttcctattgatgatacaatagaaggtctcacaggggatctgtttgatgcattcctg
aaaccttactttttggaggcatatcgtccattgaggaagggggacaattttcttgttaga
ggagggatgagaagtgtggaattcaaggtcatagaaactgaccctggggagtattgtgtt
gttgctccagacactgaaatcttttgtgagggtgagcctgtgaaaagggaggatgaggag
agacttgatgaagttggctatgatgatgtgggtggtgtgagaaaacagatggctcagatt
cgtgaactggtggaactaccattgaggcatcctcaacttttcaaatctattggtgtgaaa
ccacccaagggaattttactttatggaccccctggttctggaaagacactgatagccaga
gctgttgctaatgaaacaggtgcatttttcttttgcattaatggacctgaaatcatgtcc
aaattggctggagagagtgaaagtaatctcagaaaggcatttgaagaggctgaaaagaat
gctccttctatcatatttattgatgaaattgattcaattgctcccaagcgagagaagaca
catggtgaagttgaaaggagaattgtctcacaactcttgactctgatggatggactgaaa
tctcgcgctcatgtaatagtgatgggagctaccaaccgtccaaacagcattgatccagct
ctgagaaggtttggtagatttgatagagaaatagacattggtgttccagacgaagttggg
cgtcttgaagttcttcgcattcataccaagaatatgaagcttgcggaagaagttgatttg
gaaagaattgcgaaagatacacatggttatgttggtgcagatcttgccgctctttgcact
gaagctgcacttcagtgcattagggagaagatggatgtcattgatctggaagatgacact
attgatgctgaggtgttgaactcaatggctgttacaaatgaacacttccaaactgctctt
ggtacaagcaatccgtctgcattgcgtgaaacagtggttgaagtgcctaatgtctcatgg
caagacattggaggccttgaaaatgtcaaacgagagcttcaagagactgttcaatatcca
gtggaacacccagagaagtttgagaagttcggtatgtcaccttcgaaaggtgtacttttc
tatggtcccccaggatgtgggaaaactttacttgccaaggcaattgcaaatgaatgtcaa
gccaatttcatcagtgtcaaaggacctgaactgctcaccatgtggtttggagagagtgag
gcgaatgttcgggaaattttcgataaagctagacaatctgcaccctgcgtcctcttcttt
gacgagcttgactctattgccactcagaggggaagcagcagtggagatgctggaggagca
gctgatcgtgttctgaaccaacttctgactgaaatggatggcatgaatgcaaagaagact
gtttttataattggggccacaaacaggcctgatataattgaccctgcacttctgcgacct
ggccgtcttgaccagttaatttatattcctctgccggatgaagattctcgccatcagatt
ttcaaggcatgtctcagaaagtctcccttatcaaaggatattgatttgagagcactcgcc
aaacatactcagggatttagtggggctgatatcactgagatttgtcaacgagcctgcaaa
tatgccataagggagaacatagagaaagatatagaaagggagaagagaaggcaggagaat
cctgattcgatggatgaggatgttgatgaagtaccagagatcaaggccgctcattttgag
gagtctatgaagtatgcacgccgaagtgtcagtgatgctgatatacgcaaataccaggca
tttgctcagacattacagcagtctagaggttttggaacagaatttcggtttgcagaggct
agtggtggcgggactgctgcagctgatccatttgcaacttctaatgctgcagctgatgaa
gatgacctatatagctga
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