Solanum dulcamara (climbing nightshade): 129902461
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Entry
129902461 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129902461
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129902461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129902461
Ribosome biogenesis [BR:
sdul03009
]
Eukaryotic type
Pre-60S particles
GTPases
129902461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
GTP_EFTU_D2
EFG_III
EF-G_D2
SRPRB
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
129902461
NCBI-ProteinID:
XP_055833677
LinkDB
All DBs
Position
9:complement(72679695..72683569)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGNSEGEKIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGKLRFMDYLDEEQRRAI
TMKSSSIGLKYKEHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLIVELRLTPLEAYTRLQRIVHEVNSIVSAYKSEKYLSDVDSL
LSAPLGLVEDENPDPEFIEDDEEDTFQPQKGNVAFVCALDGWGFSICDFAKFYASKLGAS
SAALQKALWGPRYFNAKTKMIVGKKGISSGSKARPMFVQFVLEPLWQVYQAAVGDDGDRG
MLEKVIKSFNLSIPPRELQNKDPKSVLQSVMSRWLPLSDTILSMAVKHMPDPISAQSFRI
SRLLPKRELLDIGANPDVLSEAELVRKSVESCDSSPDAPCVVFVSKMFAIPSKMLPRGEI
MDDSGNGDSDECFLAFARIFSGVLHAGQKVFVLSALYDPLKEESLQKHVQEAELQSLYLM
MGQGLTPVASAKAGNVIAIRGLAHHILKSATLSSTLNCWPLSSMIFQVSPMLKVAIEPSD
PADMGALIKGLRLLNRADPFVEVSVSARGEHVLSAAGEVHLERCIKDLKERFAKINLEVS
APLVSFKETIEGDTANPLENLKLLSRNSDYLEKETPNGRCVVRVRVMKLPTALTKLLDES
SELLGDIIGGKSLQACRSSETLRGNIVEDENPIEALKKRLIDTVESDFSTGFAETERDRI
DKCKKMWQKFLNRMWALGPRQVGPNILLTPDVKGKSDDVSVLIKGSPYVSEKLGFTDDNN
DSDASPESSTSVDQTLLREAENLESSILSGFQLATASGPLCDEPMWGLAFVIEASISPLA
MQPNDSDAPIPQPEQYGLFPGQVMTVVKDACRAAVLQRKPRLVEAMYFCELNTPHDQLGN
TYTVLNRRRAHVVNEEMQEGSSLFTVHAYVPVAESFGFSDELRRKTSGAASALLVLSHWE
ALPEDPFFVPRTEEEKEEFGDGASVPQSIARKLMDSVRRRKGLPVEEKVVQYATKQRTLA
RKV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggaattctgagggtgaaaagattaggaacatatgtatacttgctcatgtggatcat
gggaagacaacattggctgaccatttgattgcttcatctggtggtggtgtgctccatccg
aagcaagcgggtaagcttaggtttatggattatttagatgaggagcagaggagggcgata
actatgaagagctcttctattggtcttaaatataaggaacattcgattaatcttatagac
tctcctggtcatatggacttttgtagtgaagtttcaactgcagctcgtttgagtgatggc
gcgttggtattagtggatgctgtggaaggtgttcacattcagacccatgcagttctgcgt
caggcatggattgagaagcttacaccgtgtctggttttgaataaaattgataggttgatt
gttgaattgagattgactccactggaggcgtatacccggttgcagaggattgttcatgag
gtgaatagtatagtgagtgcctacaagtctgaaaagtacttgtcggatgttgattctctg
ctctctgccccgttgggactagtggaagatgaaaatccagatccagagttcatagaggat
gatgaagaggatactttccaaccccagaaggggaatgtcgcgtttgtatgtgcactagat
ggatggggcttcagtatctgtgattttgctaagttttatgcttcaaaactgggtgcgagt
tcggctgccttgcagaaggcattatggggacctcggtattttaacgccaagactaagatg
attgtaggtaagaagggaattagtagtggaagtaaggctaggcccatgtttgtgcaattt
gttcttgagccactttggcaggtttatcaagctgctgtgggagatgatggagacaggggg
atgcttgagaaagttataaagtctttcaatttgtctatacctccccgggaacttcaaaac
aaggatcctaaatctgtgcttcaatctgttatgagtcgttggcttccattgtcagataca
atattgtctatggctgtcaaacacatgcctgatcctatatctgctcagtctttccgtata
tctcggctgcttccaaagagagaactcttggatataggcgccaaccctgatgtgctttct
gaagctgaactcgtcaggaaatctgtggagtcctgtgattctagccctgatgcaccttgt
gtcgtttttgtttctaagatgtttgctattccatcaaaaatgcttccgcgtggagagatt
atggatgacagtggaaatggtgactctgatgaatgtttccttgcatttgccaggatcttt
agtggggttcttcatgctggacagaaagttttcgtgctttcagcattgtatgatccacta
aaggaagaatcgctgcagaagcatgtgcaagaagctgagttgcagtccttgtatttgatg
atgggtcaagggttgacaccagtagcatcagcaaaggctggtaatgtcatagctatccga
gggcttgcccaccatatattgaagagtgcgactctttcatctacgttaaattgttggcct
ttatctagtatgattttccaagtttcacccatgcttaaagttgcaattgagccttctgat
cctgctgacatgggtgcacttattaaaggtttgaggcttctaaatagagcggaccctttt
gttgaggtttctgtttctgctaggggcgaacatgttctttctgcagcaggtgaggtgcac
ttggagagatgcattaaagatttaaaggagagatttgcaaagataaacttggaagtctcg
gcgccccttgtatctttcaaagagaccatcgaaggagatactgctaatcccttagaaaat
ttgaagctattgagccgcaactctgattatttggagaaagaaactccaaatggaagatgt
gttgttcgagtgcgtgttatgaagcttccaactgcattgacgaagctgcttgatgaaagt
tctgagttgcttggagacatcattggaggtaaatctctgcaggcttgtagaagctcagaa
actctcagaggtaacattgtagaagatgagaatccaattgaagcactcaagaaacgccta
attgacactgtggagagcgacttttctactggatttgctgagacagaaagggataggatt
gataaatgtaagaaaatgtggcaaaaattcttgaacaggatgtgggctttagggcctaga
caggttggtcccaacattctcctcaccccagatgtgaaaggaaagagcgacgatgtttct
gttcttataaagggttccccttacgtatctgaaaaattgggctttacggatgacaataat
gacagcgatgcatcaccagaatcatcaaccagtgtggatcagacccttcttcgagaagct
gagaatcttgaaagcagtatattatctggattccagttagctacagcatctggccctttg
tgtgatgagccaatgtggggtttggcgtttgttatcgaagcttccatatctccattagct
atgcaaccaaatgatagtgacgcacctattccacagccagaacagtatgggctcttccct
gggcaagttatgactgttgttaaggatgcctgcagggctgctgttctccagagaaaacct
cgacttgtggaagctatgtacttttgtgagctgaacaccccacacgaccagttgggcaac
acttatacagttcttaatcgtaggcgtgcccatgtggtaaacgaagaaatgcaggaaggt
tcttccttgttcactgtgcatgcttatgtgccagttgcagaaagctttggattctccgat
gagttgaggagaaagacttctggagctgcaagtgcgttactcgttctcagccactgggaa
gcccttcctgaggatcctttctttgtacctaggaccgaggaggagaaggaagaattcgga
gatggtgccagtgttcctcagagtatagcaagaaaactcatggattctgtgagacgaagg
aaaggtcttccggtagaggaaaaagtagtacaatacgcgacgaagcagaggacattggct
cgcaaagtgtag
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