Solanum dulcamara (climbing nightshade): 129902857
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Entry
129902857 CDS
T09577
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129902857
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdul01007
]
129902857
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129902857
Enzymes [BR:
sdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
129902857
Amino acid related enzymes [BR:
sdul01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129902857
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129902857
Prokaryotic type
129902857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF724
FapA
Motif
Other DBs
NCBI-GeneID:
129902857
NCBI-ProteinID:
XP_055834264
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Position
9:complement(8560157..8567830)
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AA seq
509 aa
AA seq
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MVLHCCFTGTTLHSLKLAAIPYFSRTLTSRLTPFYNRPLFPLVVRSLSAPAVQTSGTATE
EYQVVKPQWKAAIDFKWIRDNKESVAVNIKNRNSNANLELVLQLYEKLLNVQKEVEKLRA
ERNAVANKMKGKLEPSERQKLIEEGKNLKEELVTLEEDLLKLTDELQQEAQSIPNMTHPD
VPLGGEDSSTVRKMVGKPAEFSFAVKDHVQLGKDLDLFDFDAAAEVSGSKFYYLKNEAVI
LEMGLVNWAVSEAMKRGFTPLTTPEIVRSSVVEKCGFQPRGTNTQVYSIENSDQCLIGTA
EIPVGGIHMDSILSESSLPLKYVAFSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRP
DESDSYHEELIEIEEELFSSLGFHFKTLNMASEDLGAPAYRKFDVEAWMPGLGRYGEISS
ASNCTDYQSRRLGIRYRPESSSSSSPKKGKNTAPTQFVHTLNATACAVPRMIVCLLESFQ
QEDGSVIIPEPLRPFMGGLQIIKPKHIQN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtactgcactgctgcttcaccggaaccactctccattccctcaaacttgctgcaatc
ccttacttctccagaactctaacctcccgtctaacgcccttctataacaggcctctgttc
ccgcttgtcgttagatccctttctgctccggccgtccaaacttccggcaccgcaacagaa
gaatatcaagtggtgaagcctcaatggaaagctgcaattgatttcaagtggataagagat
aataaggagtcagttgcggttaatattaagaataggaactccaatgctaatctggagctt
gttcttcagctctacgagaagttgctcaatgttcagaaggaggttgaaaagctacgagcg
gagagaaatgcagttgcaaacaagatgaaaggaaaactagaaccctcagagcgccaaaag
ctcatagaagaaggaaagaatctgaaggaagaacttgttactttggaagaagacctgcta
aaacttactgatgagctgcagcaagaagcacaatccatacctaatatgacacatccagat
gttccattaggaggggaagattcttcaacagtcaggaaaatggttggtaagcctgctgag
tttagctttgctgttaaggaccacgtccagctgggaaaagacctagatctgttcgatttt
gatgctgcagctgaggtcagtgggtccaaattctattacttgaagaatgaagcagttatt
ttagagatgggtcttgtaaactgggcagtttcagaggccatgaaaagaggttttacacct
ctgacaactcctgagattgtacggtcatctgtggtggagaaatgcggatttcaaccccgt
ggaacaaacactcaggtgtactccatcgaaaatagtgatcagtgcctgattggcaccgct
gagattccagtaggcggaatacatatggactccatcctgtctgagtcgtcattaccattg
aaatatgtggctttctcccattgcttccggactgaggctggtgctgcaggagctgcaact
aggggactttatcgagttcatcagttcagcaaggtggaaatgttcatactatgccgacca
gatgaaagtgattcataccatgaagaactcattgaaattgaagaagaactcttctcatca
ctcggattccatttcaagacactgaacatggcatctgaggatctaggtgcaccagcatat
cgtaaatttgatgtggaggcctggatgccaggattgggccgttatggagagatatcaagt
gcatcaaattgtacagattatcaaagccgtcggctgggaataagatatcgccccgaatca
tcatcatcatcaagtcctaaaaagggcaaaaacacagctccgacacagtttgttcacacg
ttaaatgctacagcatgtgcagttcctcgaatgatagtctgcttgcttgagagtttccag
caagaagatggatcagttatcataccagagccattgagaccattcatgggcgggcttcag
attattaaaccaaaacatatacagaactga
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