Solanum dulcamara (climbing nightshade): 129903267
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Entry
129903267 CDS
T09577
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129903267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdul03019
]
129903267
03016 Transfer RNA biogenesis [BR:
sdul03016
]
129903267
03012 Translation factors [BR:
sdul03012
]
129903267
04131 Membrane trafficking [BR:
sdul04131
]
129903267
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129903267
Messenger RNA biogenesis [BR:
sdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129903267
Transfer RNA biogenesis [BR:
sdul03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129903267
Translation factors [BR:
sdul03012
]
Eukaryotic type
Elongation factors
129903267
Membrane trafficking [BR:
sdul04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
129903267
Exosome [BR:
sdul04147
]
Exosomal proteins
Proteins found in most exosomes
129903267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
SRPRB
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
129903267
NCBI-ProteinID:
XP_055834749
LinkDB
All DBs
Position
9:73768286..73771405
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPSGAKVTKAAQKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaaggttcatatcaacattgtggttattggccatgttgattctggaaaa
tcgaccaccactggtcacttgatctacaagctaggtggtatcgataagcgtgtcattgag
aggtttgagaaagaagctgctgagatgaacaagaggtcatttaagtatgcctgggtgctt
gacaagctcaaggctgagcgtgaacgtggtatcacaatcgatattgccttgtggaagttt
gagaccacaaagtactactgtactgttattgatgctcctggtcatagggatttcatcaag
aacatgattactggtacctctcaagctgattgtgctgtcctgattatcgactccaccact
ggtggttttgaagctggtatctctaaggatggacagactcgtgagcatgcgttgcttgct
ttcacccttggtgttaagcaaatgatttgctgctgcaacaagatggatgctaccacacct
aagtactccaagtctaggtacgatgaaatcgtgaaggaagtgtcttcctacctcaagaag
gttggttacaaccctgagaagatacccttcgtccccatttctggtttcgagggggataat
atgattgagagatcgactaacctggactggtacaagggtccaacccttcttgaggctctt
gaccagattaatgagcctaagaggccctcggacaaacccctgcgtctcccacttcaggat
gtctataagattggtggtattggaactgtccctgttggtcgtgttgaaactggtgtcatc
aagcctggtatggttgtgacttttggtcctactggtctgactactgaagttaagtctgtt
gagatgcatcatgaagctcttcaggaggcacttcctggtgacaatgttggtttcaacgtc
aagaatgttgcggtcaaggatcttaagcgtggatatgttgcttccaactccaaggatgac
ccagctaagggggctgccagctttacctcccaggttataatcatgaaccatccaggacag
attgggaatggatatgccccagtgctggactgtcacacctcccacattgctgtcaagttt
gctgagattttgactaagattgacaggcgttctggtaaggaactcgagaaggagcctaag
ttcttgaagaacggtgacgctggtatggttaagatgattcctaccaagcccatggttgtt
gagacattctctgagtacccaccattgggacgttttgctgtgagggacatgcgtcaaact
gtcgctgttggcgttataaagagtgttgacaagaaggacccatctggggccaaggtcacc
aaggctgctcagaagaaaaaatga
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