KEGG   Solanum dulcamara (climbing nightshade): 129903528
Entry
129903528         CDS       T09577                                 
Name
(RefSeq) RING-H2 finger protein ATL56-like
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129903528
Enzymes [BR:sdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129903528
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129903528
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-RING_5 zf-ANAPC11 zf-RING_UBOX zf-C3HC4_2 RINGv zf-RING_16 Prok-RING_4 zf-RING_Vps41 PHD_NSD zf-Nse zf_RING_Vps8 zf-C3HC4_3 SLX1_C zf_RING_Vps8_fungal zf-C3HC4_4 FANCL_C RING_XB3-XBAT31 zf-RING-like zf-RING_4 C1_1
Other DBs
NCBI-GeneID: 129903528
NCBI-ProteinID: XP_055835061
LinkDB
Position
9:complement(10564247..10564765)
AA seq 172 aa
MTSFTKFFSYFNQHINIFFFSWIPKALRFLILVFFVSISAYAQRLEKHNCRKIINKRSTK
FVYKKRKLLGFSATEPIDCAICLSDFEQGDKGRKIESCNHIFHENCLDKWLMDGKGQATC
PLCRSLIIPENMEEVHRKIKDEGVTFGIFEEELALMLLSGLTSGCSQWRSHT
NT seq 519 nt   +upstreamnt  +downstreamnt
atgacgtctttcactaaattcttctcgtatttcaaccaacatatcaacattttcttcttc
tcatggattcctaaagcattacggttcctaatccttgtgttttttgtttccatctctgca
tacgcacagagactagaaaaacacaattgcaggaaaattataaacaaaaggagcactaaa
tttgtgtacaaaaagagaaaattactgggattttctgctaccgaaccgattgattgcgcg
atttgtttatcggatttcgagcagggagataaagggaggaaaattgaaagctgcaatcat
attttccatgaaaattgcttagataaatggctgatggacgggaaaggacaagccacgtgt
cctctttgccggagcttgattataccggaaaatatggaggaagttcaccggaaaattaaa
gacgaaggagtgacgtttggtatatttgaggaggaacttgctctgatgttgctctctggt
ttgactagtggatgttctcagtggcgtagccacacatag

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