Solanum dulcamara (climbing nightshade): 129903752
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Entry
129903752 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129903752
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129903752
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129903752
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129903752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
129903752
NCBI-ProteinID:
XP_055835266
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All DBs
Position
9:complement(38428023..38436046)
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AA seq
185 aa
AA seq
DB search
MDGPPENDVCSICHGTFHVPCQANCSHWFCASCILQVWDCGSALQACKCPLCRRPITLLV
PSESASRLHRDPEVPEVLRRVEQYNRHFGQHANGLLQRMQDLPFLLRRLMRDMTDPQRSL
PFVIRARVYLAVFLSGIYVLSPVDLIPEGFLGIIGLLDDLIIMFICFLHVAALYRSVLLF
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatggaccaccagagaatgatgtttgttctatatgccatggcacttttcatgtccct
tgtcaagcaaattgttcccattggttttgtgctagctgtattctacaagtttgggattgt
ggatccgcccttcaagcatgtaaatgtccattatgccgccgtccgattaccttattggtt
cctagtgagtctgcatcaaggttgcatcgagatcctgaagttcctgaggtcttacgaaga
gttgagcaatataaccgccattttggccaacatgccaatggccttctccagagaatgcaa
gatcttccgtttctcctccggagattaatgcgagatatgacagatcctcaaagatctctt
ccatttgtcatcagggcacgtgtctatttggcagtatttttaagtggtatatacgtcctt
agccccgtggaccttatcccagaaggttttttgggtattataggtttactagatgatctg
attatcatgttcatctgtttcctgcatgttgctgctctgtatagatcagttcttctgttt
cgccatggaggttcttaa
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