KEGG   Solanum dulcamara (climbing nightshade): 129904097
Entry
129904097         CDS       T09577                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03082  ATP-dependent chromatin remodeling
sdul03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129904097
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129904097
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sdul01009]
    129904097
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129904097
   03036 Chromosome and associated proteins [BR:sdul03036]
    129904097
Protein phosphatases and associated proteins [BR:sdul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129904097
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     129904097
    SWI/SNF complex
     129904097
Chromosome and associated proteins [BR:sdul03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    129904097
   PBAF complex
    129904097
   SWI/SNF complex
    129904097
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 129904097
NCBI-ProteinID: XP_055835601
LinkDB
Position
9:complement(20521807..20538918)
AA seq 241 aa
MKPHSAWGSLKNPVKFKIPTAENLVPIRLDIEIDGQRFRDAFTWNPNDPDSEVVVFAKRT
VKDLKLPPAFVTQIAQSIQSQLTEFRSYEGQDMHTGERVVPIKLDLRVNHTVIKDHFFWD
LNNFESDPEEFARTFCKDMGIENPEVGPAIAIAIREQLYEIAMQSVASARESRANKKGRR
GMEHLSASKIGLPALDLVKLFGIKSSVIRKKRDWDVYEPIVDLLSNEEVDALEAREERHA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaaccccattcggcatggggttcactgaagaacccagtgaagttcaagattccaaca
gccgagaatcttgttcctatccgtctcgacatcgaaattgatggccaaagatttagagat
gcttttacttggaacccaaatgatcctgactcagaggtggtggtgtttgcaaagagaact
gtgaaggatttgaaacttcctcctgcttttgtcactcagatagcgcaatccattcagtca
caattgacagaatttcggtcatacgaaggacaagatatgcacactggcgagagagttgtt
cctatcaagcttgatctccgagtaaatcacacagttatcaaggatcactttttctgggac
ttgaacaattttgagagtgatcctgaagagtttgcacggacattttgtaaagatatggga
attgaaaacccagaagttggacctgcgattgcgatagcaattagagaacaactttatgag
attgcaatgcaaagtgttgcatcagcgagagaaagcagggcaaataagaaaggacgcaga
ggaatggaacatctctcagccagtaaaataggtttgcctgcattggacctggtgaagcta
tttggcattaaatcaagtgtcatccggaaaaagagggactgggatgtatatgaaccaatt
gtcgatctcctatcaaatgaagaggtggatgcccttgaggctagagaagagaggcatgct
cgatga

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