KEGG   Solanum dulcamara (climbing nightshade): 129904252
Entry
129904252         CDS       T09577                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03013  Nucleocytoplasmic transport
sdul03015  mRNA surveillance pathway
sdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129904252
  09122 Translation
   03013 Nucleocytoplasmic transport
    129904252
   03015 mRNA surveillance pathway
    129904252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129904252
   03041 Spliceosome [BR:sdul03041]
    129904252
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     129904252
Spliceosome [BR:sdul03041]
 Complex C
  Other components
   EJC/TREX
    129904252
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 129904252
NCBI-ProteinID: XP_055835769
LinkDB
Position
9:complement(19225064..19231776)
AA seq 195 aa
MANAEVEAVDFEPEEDDLMDEDVDASSSPRATIPKLKSAITGGSSSAPKKTKGRGFREEA
AEADRNARMSARFDSLDSEGGPGPERSIEGWIVLVTGINEETQEDDLHNDFGDFGEIKNL
HLNLDRRTGFVKGYAFIEYENFEEAQRAISEKDGAEFLTQTINVDWAFSRGPFKRRNARR
RSPRGHRSRSPRRRF
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgaatgcagaggtagaggcggttgacttcgagccagaggaggacgatctgatggat
gaagacgtggatgcttcgtcgtctcctagggctacaattcctaagctcaaatctgccatc
actggaggctcatcctccgctcctaagaagaccaagggacgtggtttccgtgaagaagct
gctgaggctgaccgtaatgcccgtatgtctgctcgctttgattctctcgattctgagggc
ggtcctggtcctgaacgatccattgaaggatggattgttttagttactgggattaatgaa
gaaacacaagaagatgatcttcataatgatttcggtgattttggagaaatcaagaatttg
catttgaatctggatcgtcggactggatttgtcaagggatatgcattcatagaatatgag
aactttgaagaagcacaaagagctataagtgagaaggatggagctgagtttctcacacag
actataaatgttgattgggcattcagcaggggtcctttcaagaggaggaatgctagacgg
agatcaccacgtggccatcgttctagaagtcccaggcggagattctaa

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