Solanum dulcamara (climbing nightshade): 129904298
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Entry
129904298 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129904298
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdul03009
]
129904298
Enzymes [BR:
sdul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
129904298
Ribosome biogenesis [BR:
sdul03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
129904298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF3253
Motif
Other DBs
NCBI-GeneID:
129904298
NCBI-ProteinID:
XP_055835818
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All DBs
Position
9:2226180..2231689
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AA seq
375 aa
AA seq
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MVIRRYNPLSMFSSSVFIPFPRQQFYRCNLPIFTQSLQPHILPSLLSTTTTSTLGRHFTL
SFYSNSAQTSTDDSPDELQHQLSKSKQSPLKPGLYLVGTPIGNLEDITLRALRVLKSADV
ILSEDTRHSGKLLHYYNIKTPLLSYHKFNESQRAQAVLRKLQDGEIVALISDAGTPGISD
PGMDLAKLCADKNIPVVPIPGPSAVVTALSASGLPTNEFSFVGFLPKHNSSRKERLILSA
NESATQIFFIPPHKLSQFLEEAAAIFGESRQCVMAREMTKVHEEFWRGTINKAKEAFLAH
QRKGEITFLIEGKSISTDEGPSESQLENELRELISEGHSLSMAVKLVASGKLMKRKAIYS
LALRKFGGQLDSEDD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggtgatacggcgctataatcccctatccatgttctcctcctctgtcttcatcccattt
ccccggcagcagttttacagatgcaatcttccaatattcactcaatctctccaaccccac
attctcccttcccttctttctaccaccaccacctccactctcggtagacatttcaccctt
tcattctattccaacagtgctcaaacctccactgatgactcccctgatgaactgcaacat
cagctatccaaatctaaacaatcccctttgaaaccaggtttgtatctcgtgggaactcca
attggaaatcttgaagatattactctcagggctttgcgggtcttgaaatcggcagacgtg
attctttcggaagatacaaggcactctggaaaactgctacactattacaacattaaaact
cctcttctcagttatcacaagtttaacgagtctcaaagagcacaagcggtgctgaggaaa
ttacaagatggtgaaattgtcgccttgatcagtgatgctggcacaccaggcatcagtgat
cccggaatggacctggctaagctgtgcgcggataaaaatatacctgttgttcccatccct
gggccttctgctgtggtaactgctctttcggcctctggcttacccacgaatgagttctca
tttgttggttttcttccaaaacataattcttcgagaaaggaaaggctgatactttcagca
aatgaatctgccacacaaatcttcttcattccacctcacaagctttctcaatttcttgaa
gaggctgctgctatatttggtgagagtaggcagtgtgtcatggctcgggagatgaccaaa
gttcatgaggagttctggcgtggaaccatcaataaagcaaaagaagcattcttggcacac
caacgaaagggtgaaattactttcttaattgaaggcaaatcgatcagtacagatgagggc
ccatcagagtcccagctggagaacgagttgagagagctgatttcggagggacattctctt
tcaatggccgtcaagttggtagcaagtggaaaattgatgaaacgaaaagcaatatattct
cttgcattgaggaaattcggaggacaactagattcagaggatgactag
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