Solanum dulcamara (climbing nightshade): 129904368
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Entry
129904368 CDS
T09577
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129904368
Membrane trafficking [BR:
sdul04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
129904368
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
MRP-S27
ECSIT_N
Motif
Other DBs
NCBI-GeneID:
129904368
NCBI-ProteinID:
XP_055835907
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Position
9:complement(76370921..76376598)
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AA seq
479 aa
AA seq
DB search
MRLLSHHFSSKDLLSMISCSSSWLSKAESLSVWYNFKCHYHTQQSEQDRKWRQADEEHKQ
NTNQGPSIGSPARIQKLIASQSDPLLAKEIFDLASREPNFQHYYATFHTLILKLGRSRQF
SLMQSILTSLKSQHYSVSPSLFSHIIQIYGDAGLPDKALKTFYTILEFNMKPLPKHLNLI
LEILVTHRNFLRPAFDLFRSAHTYGVLANTESYNILMRAFCLNDDLSIAYSLFNQMFKRD
ISPNVESYRILMQGLCRKSQVNTAVDLLEDMLNKGFVPDALSYSTLLNSLCRKKKFKEAY
KLLCRMKVKGCNPDIIHYNTVILGFCREGRAADACKILEDMPSNGCIPNLVSYRSLVGGL
SDQGMYDEAKTYMVEMMSKGFSPHFSVVHAVVKGFCNLGKIEEAYGVVGSILRHGEPLHT
DTWEVIISRILEWDTAEKIGNILEELIRAEIKPETRIVEAGARLGEYLMNRVKSKSRKG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagacttctttcacatcacttcagctccaaagacctcttgtccatgatcagttgttct
tcctcttggctgtcaaaggccgagtcactgtctgtctggtacaattttaaatgtcattat
catacacaacagtccgagcaagatagaaaatggagacaagcagatgaagaacataaacag
aacacgaaccagggaccgtctattggctctccagctcgaatccagaagcttattgcctcc
caatcagatccgctccttgctaaagaaatttttgatttagcctcacgagaacccaatttt
cagcactactatgccactttccacaccctcatcctcaagcttggccgttcccgccagttc
tccctcatgcagtccatcctcacttccctcaagtcgcagcattattccgtctccccatct
cttttttcgcacatcatccaaatctatggtgatgctggcctacctgacaaagcccttaaa
actttctatactatcctggaattcaatatgaagccccttccgaagcatctcaacctcatt
cttgaaatcctcgtaactcaccggaactttcttcgccctgcatttgatctcttcagatct
gcacatacatacggagtcttggccaacactgagtcctacaacattctaatgcgggcgttc
tgtttgaatgatgatttaagtattgcatactcgctgtttaatcaaatgtttaagagagac
atcagtcctaatgtagagtcatataggattctgatgcagggtttgtgccgaaaaagtcaa
gtgaatacagctgttgacttgctggaggacatgttgaataaaggttttgttcccgatgct
ttaagttatagtactctattgaacagcttgtgtcggaaaaagaaatttaaggaggcttac
aagcttctttgcagaatgaaagtaaagggttgcaatcctgacattatccattacaataca
gtaattctggggttctgtagagaaggtcgtgctgctgatgcctgtaaaatcctcgaggac
atgccatcaaatgggtgtattcccaatttggtttcatataggtcattagttgggggtcta
agcgatcagggaatgtacgatgaggctaagacttacatggtggaaatgatgtcaaaaggg
ttctctccacatttttctgttgttcatgcagttgtgaaaggtttctgcaacctaggtaaa
attgaggaagcttatggagtagtggggagtattttgaggcacggtgaacccctacataca
gatacatgggaagtaatcatatccaggatcttggaatgggatactgctgaaaaaattggg
aatatcttggaggaacttattagagctgagataaaacctgaaacgagaatagtggaggct
ggcgctaggttgggtgaatatttgatgaacagggtaaaaagtaaatcaaggaaaggttga
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