Solanum dulcamara (climbing nightshade): 33910539 Help Entry 33910539          CDS       T09577                                  Symbol rpoB, CK881_pgp077 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism sdul  Solanum dulcamara (climbing nightshade) Pathway sdul03020   RNA polymerase Brite KEGG Orthology (KO) [BR:sdul00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     33910539 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sdul03021]     33910539 (rpoB)    03400 DNA repair and recombination proteins [BR:sdul03400]     33910539 (rpoB) Enzymes [BR:sdul01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      33910539 (rpoB) Transcription machinery [BR:sdul03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      33910539 (rpoB) DNA repair and recombination proteins [BR:sdul03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       33910539 (rpoB) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  33910539 NCBI-ProteinID:  YP_009420653 UniProt:  A0A222AJQ3 LinkDB All DBs Position CP: Genome browser AA seq 1070 aa AA seqDB search MLGDGNEGISTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV EPLIKERDAVYESLTYSSELYVSAGLIWKNSRDMQEQTIFIGNIPLMNSLGTSIVNGIYR IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISI LVLSSAMGLNLREILENVCYPEIFLSFLNDKERKKIGSKENSILEFYQQFACVGGDPVFS ESLCKELQKKFFQQRCELGRIGRRNMNRKLNLDIPQNNTFLLPRDILAAADHLIGLKFGM GALDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSPP LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERSTGVRMLYLSPGSDEYYMVA AGNSLALNRDIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN RALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGALAIAEREGRVVYSNTDKILLAGN GDILSIPLVIYQRSNKNTCMHQKLRVPRSKCIKKGQILADGAATVGGELALGKNVLVAYM PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIHTHVTSQGPEKVTKEIPHLEAHLLRNL DKNGIVMLGSWVETGDILVGKLTPQVVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG GRGRVIDVRWIQKRGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP YLQDGRSVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHG RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL GTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgctcggggatggaaatgagggaatatctacaatacctggatttaatcagatacaattt gaaggattttgtaggttcattgatcaaggtttgacggaagaactttataagtttccaaaa attgaagatacagatcaagaaattgaatttcaattatttgtggaaacatatcaattggtc gaacccttgataaaggaaagagatgctgtgtatgaatcactcacatattcttctgaatta tatgtatccgcgggattaatttggaaaaacagtagggatatgcaagaacaaacaattttt atcggaaacattcctctaatgaattccctgggaacttctatagtcaatggaatatataga attgtgatcaatcaaatattgcaaagtcccggtatttattaccgatcagaattggaccat aacggaatttcggtctataccggtaccataatatcagattggggaggaagatcagaatta gaaattgatagaaaagcaaggatatgggctcgtgtaagtaggaaacaaaaaatatctatt ctagttctatcatcagctatgggtttgaatctaagagaaattctagagaatgtttgctat cctgaaatttttttgtcttttctgaatgataaggagagaaaaaaaattgggtcaaaagaa aattccattttggagttttatcaacaatttgcttgtgtaggtggcgatccggtattttct gaatccttatgtaaggaattacaaaagaaattctttcaacaaagatgtgaattaggaagg attggtcgacgaaatatgaaccgaaaactgaaccttgatataccccagaacaatacattt ttgttaccacgagatatattggcagccgccgatcatttgattggactgaaatttggaatg ggtgcacttgacgatatgaatcatttgaaaaataaacgtattcgttctgtagcagatctt ttacaagatcaattcggattggctctggttcgtttagaaaatgtggttcgggggactata tgtggagcaattcggcataaattgataccgacacctcagaatttggtaacctcacctcca ttaacaactacttatgaatcctttttcggtttacacccattatctcaagttttggatcga actaatccattgacccaaatagttcatgggagaaaattaagttatttgggccctggagga ctgacagggcgcactgctagttttcggatacgagatatccatcctagtcactatggacgt atttgcccaattgacacatctgaaggaatcaatgttggacttattggatccttagcaatt catgcgaggattggtcattggggatctctagaaagccctttttatgaaatttctgagagg tcaaccggggtacggatgctttatttatcaccaggtagcgatgaatactatatggtagcg gcaggaaattctttagccttaaatcgggatattcaggaagaacaggttgttccagctcga taccgtcaagaattcttgactattgcatgggaacaggttcatcttcgaagtatttttcct tttcaatatttttctattggagcttccctcattccttttatcgaacataatgatgcgaat cgagctttaatgagttctaatatgcaacgtcaagcagttcctctttctcgctccgagaaa tgcattgttggaactgggttggaacgacaagcagctctagattcgggggctcttgctata gccgaacgcgagggaagggtcgtttatagcaatactgacaagattcttttagcaggtaat ggagatattctaagcattccattagttatatatcaacgttccaataaaaatacttgtatg catcaaaaactccgagttcctcggagtaaatgcattaaaaagggacaaattttagcggat ggtgctgctacggttggtggcgaacttgctttggggaaaaacgtattagtagcttatatg ccgtgggagggttacaattctgaagatgcagtacttattagcgagcgtttggtatatgaa gatatttatacttcttttcacatacgtaaatatgaaattcatactcatgtgacaagccaa ggccctgaaaaagtaactaaggaaataccgcatttagaagcccatttactccgcaattta gacaaaaatggaattgtgatgctgggatcttgggtcgagacgggtgatattttagtaggt aaattaacaccccaggtcgtgaaagaatcttcgtatgccccggaagatagattgttacga gctatacttggtattcaggtatctacttcaaaagaaacttgtctaaaattacctataggt ggcaggggtcgggttattgatgtgaggtggatccagaaaaggggtggttctagttataat cccgaaacgattcgtgtatatatttcacagaaacgtgaaatcaaagtaggcgataaagta gctggaagacacggaaataaaggtatcatttccaaaattttgcctagacaagatatgcct tatttacaagatggaagatccgttgatatggtctttaacccattaggagtaccttcacga atgaatgtcggacagatatttgaatgttcactagggttagcagggagtctgctagacaga cattatcgaatagcaccttttgatgagagatatgaacaagaagcttcgagaaaactagtg ttttctgaattatatgaagccagtaagcaaacagcgaatccatgggtatttgaacccgaa tatccaggaaaaagcagaatatttgatggaaggacggggaatccttttgaacaacccgtt ataataggaaagccttatatcttgaaattaattcatcaagttgatgataaaatccatggg cgttccagtggacattatgcgcttgttacacaacaaccccttagaggaagagccaaacag gggggacagcgggtaggagaaatggaggtttgggctctagaagggtttggggttgctcat attttacaagagatgcttacttataaatcggatcatattagagctcgccaggaagtactt ggtactacgatcattgggggaacaatacctaatcccgaagatgctccagaatcttttcga ttgctcgttcgagaactacgatctttagctctggaactgaatcatttccttgtatctgag aagaacttccagattaataggaaggaagcttaa

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