Streptomyces durmitorensis: M4V62_02645
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Entry
M4V62_02645 CDS
T08503
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdur03032
]
M4V62_02645
03400 DNA repair and recombination proteins [BR:
sdur03400
]
M4V62_02645
Enzymes [BR:
sdur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M4V62_02645
DNA replication proteins [BR:
sdur03032
]
Prokaryotic type
DNA Topoisomerases
M4V62_02645
DNA repair and recombination proteins [BR:
sdur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M4V62_02645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
UQT54063
LinkDB
All DBs
Position
complement(620927..623050)
Genome browser
AA seq
707 aa
AA seq
DB search
MSASPHPSPATAPAGAVTGGSDYTARHLMVLEGLEAVRKRPGMYVGSTDSRGLLHCLWEI
IDNSVDEALGGHCGHIEVILHDDASVEVRDNGRGIPVDTEPRSGLSGVEVAYTKLHAGGK
FGGGSYVASGGLHGVGASVVNALAHRLDVEVDRHGHTHAVSFRRGTPGIYHGNGPTADFT
PASGLRKTARTPKTRTGTRVRYWADRQIFLKDAKLNLETLHQRARQTAFLVPGLTIVVRD
EYGLGEGGTKGEESFRFDGGISEFCEYLAQDKAVCDVLRLSGQGSFKETVPVLDDHGQMT
PTEVTRDLVVDVAMRWGTGYDTTLRSFVNIIATPKGGTHVSGFERSLTKTMNEVLRSQKV
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVAQVIAKELKAFLT
STRRDAKAQARAVMDKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVERS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKASVSDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIILLVDADVDGAHIRILLLTLFQRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDNELRETLLEYQRKGIRFKDSIQRYKGLGEMDADQLAETTMDPRY
RTLRRVNIGDLDAAEQVFDLLMGNDVAPRKEFITSSAATLDRSRLDL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcatccccgcacccctcacccgcaaccgccccggccggggccgtgacaggcggt
tccgactacaccgcacggcacttgatggttctggaaggcctggaggcggtccgcaagcgt
ccggggatgtacgtcgggtcgacggacagccgtggcctgctgcactgcctctgggagatc
atcgacaactccgtcgacgaggccctgggaggccactgcggccacatcgaagtcatcctc
cacgacgacgcctcggtggaggtccgggacaacggccgaggcatccccgtcgacaccgaa
cctcgttcaggactctcaggggttgaggtcgcctacaccaagctgcacgcgggcgggaag
ttcggcggtggctcgtacgtggcctccggcggcctgcacggcgtgggcgcttccgtggtc
aacgccctggcccaccgcctggacgtggaggtcgaccggcacggccacacccatgccgtc
agcttccgccgcggtacgcccggcatctaccacggcaacggccccacggcggacttcacc
cccgccagtggcctccgcaagaccgcgaggacacccaagacgcgtacgggtacgcgggtg
cggtactgggcggatcgccagatcttcctcaaggatgccaagctcaatttggagacgctg
catcagcgtgcccggcagacggcgtttttggtgccgggtctgacgattgtggtgcgtgat
gagtacggtctgggggagggcggtaccaagggggaggagtccttccgtttcgacggcggg
atcagtgagttctgtgagtatctggcgcaggacaaggcggtgtgtgatgtgctgcggctg
tcggggcagggcagtttcaaggagaccgtgccggtcctggatgatcacgggcagatgacg
cccaccgaggtgacccgtgatctcgtggtggatgtggcgatgcgctggggcacgggctac
gacacgacgctgcggtccttcgtgaacatcattgccacgcccaagggcggcacgcatgtg
tcgggcttcgagcgctcgctgacgaagacgatgaatgaggtgctgcgcagtcagaaggtg
ctgcgggtggccgaggacgacatcgtcaaggacgacgccctggaggggctgaccgcggtg
gtcacggtgcgtctggcggagccgcagttcgaggggcagaccaaggaggtgctgggcacc
tcggcggccaaccggattgtcgcccaggtgatcgccaaggagctcaaggcgtttttgacg
tcgaccaggcgtgatgcgaaggcgcaggcgcgggcggtgatggacaaggcggtggccgcg
gcccgtacgcggatcgcggcgcgtcagcacaaggatgcccagcggcgtaagacggcgctg
gagtcgtcgtcgttgccggcgaagctggcggattgccgcagtgatgatgtggagcgcagc
gagctgttcatcgtggagggtgactcggcgctgggcacggcgaagctggcgcggaactcg
gagttccaggcgttgttgccgatccgggggaagatcctcaatgttcagaaggcgtccgtg
tcggacatgctgaagaacgccgagtgcggggcgatcatccaggtcataggggcggggtcg
gggcggaccttcgacatcgacgcggcccgctacgggaagatcattcttctggtggacgcc
gatgtggacggcgcgcacatccggatcctgctgctcaccctcttccagcgttatatgcgt
ccgatggtggaggcgggccgggtgttcgcggcggtgccgccgttgcaccggatcgagctg
gtgcagccgaagaaggggcaggacaagtacgtctacacgtactcggacaatgagctgcgc
gagacgctccttgagtatcagcgcaaggggatccggttcaaggattccattcagcgttac
aagggtctgggtgagatggacgcggaccagctcgcggagacgacgatggatccgcgttat
cgcacgctgcggcgggtcaacatcggtgacctggacgccgccgagcaggtcttcgatctc
ctgatgggcaacgacgtggcaccccgcaaggaattcatcaccagctcagccgccacactc
gaccgctcacggctggacctgtag
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