Streptomyces durmitorensis: M4V62_11405
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Entry
M4V62_11405 CDS
T08503
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdur03016
]
M4V62_11405
Enzymes [BR:
sdur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M4V62_11405
Transfer RNA biogenesis [BR:
sdur03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M4V62_11405
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UQT55652
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All DBs
Position
2512609..2513886
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AA seq
425 aa
AA seq
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MTDAQETAADSSLRTTGGGPPDDVETAPIPLDEPRDGIPPVVADETALAEVIAAFAAGSG
PVAVDAERASGYRYGQRAYLVQLRREGAGSTLIDPVACPDLSGLGEAIAGAEWVLHAATQ
DLPCLREIGMIPTSIFDTELAGRLAGFPRVGLGAMVEGVLGFVLEKGHSAVDWSTRPLPD
PWLRYAALDVELLVDLRDALEKELDRQGKLEWAREEFDAISSAPPPPPRVDPWRRTSGMH
KVRRRRQMAVVRELWTARDKVAQRRDVSPGKVLSDGAIVEAALGLPPNVHALAGLTGFGH
RMGRRQLEQWQAAVDRAKALPDSELPQPGAAVSGPPPPRSWADRDPAAAARLSAARAAVS
ALAEELNMPQENLITPDTVRRVCWEPPTEVSAESVSTALAAHGARRWQITQVTPALVTAL
SRPAP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacagctcactgcgaaccaccggaggcggccct
ccggacgacgtcgaaacggcgccgatccctttggacgagccgcgtgatggcattcctccg
gtggtcgccgacgagaccgccctcgcagaggtgatcgccgctttcgcggctggcagtggc
cccgtggccgtggacgccgaacgtgcgtccggctatcggtacggccagcgtgcctatctc
gtgcagttgcgccgtgaaggcgcgggcagcaccttgatcgaccccgtggcctgccccgac
ctgtcggggctcggcgaggcgatcgccggtgcggagtgggtgctgcacgccgccacgcag
gacctgccctgcctccgcgaaataggcatgatccccaccagcatcttcgacaccgaactc
gccgggcgcctcgccggtttcccccgggtcggcctcggcgcgatggtcgagggcgtgctc
ggcttcgtcctggagaagggccactcggcggtcgactggtcgacgcgcccactgcccgac
ccctggcttcgctacgcggcgctcgacgtcgagctgctcgtggacctgcgggacgccctg
gagaaggagctcgaccggcagggcaagctggagtgggcccgcgaggagttcgacgcgatc
tcctccgctccgccgcctccgcctcgcgtggacccctggcggcgtacgtccggcatgcac
aaggtgcggcgccgtcgtcagatggcggtcgtacgtgagctgtggaccgcccgcgacaag
gtggcccagcggcgtgacgtgtcgccgggcaaggtcctcagtgacggcgcgatcgtggag
gcggcgctggggctgccccccaacgtgcacgcgctcgccgggctcaccggcttcgggcat
cgcatgggccgccgtcagctggagcagtggcaggccgcggtggaccgggccaaggccctg
cccgactccgagcttccgcagccgggggcggccgtgtcggggcccccgccgccccgctcc
tgggcggaccgcgacccggccgccgcggcgcgcctctccgcggcgcgggcggctgtctcg
gcgctggccgaggaactgaacatgcctcaggagaacctgatcactccggacacggtacga
agggtgtgctgggagccgccgacggaggtttccgccgagtccgtctccaccgcgctggcc
gctcacggtgcgcgccgctggcagatcacccaggtcaccccggccttggtgaccgcgctg
agccgcccggcgccgtag
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