Streptomyces durmitorensis: M4V62_12300
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Entry
M4V62_12300 CDS
T08503
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdur03032
]
M4V62_12300
03400 DNA repair and recombination proteins [BR:
sdur03400
]
M4V62_12300
Enzymes [BR:
sdur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M4V62_12300
DNA replication proteins [BR:
sdur03032
]
Prokaryotic type
DNA Topoisomerases
M4V62_12300
DNA repair and recombination proteins [BR:
sdur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M4V62_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UQT55820
LinkDB
All DBs
Position
complement(2774424..2776547)
Genome browser
AA seq
707 aa
AA seq
DB search
MTAETSVPSTALLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLLHCLWEI
IDNSVDEALGGYCDHIEVILHDDASVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRAGHTHAISFRRGVPGAFAKPGPDADFD
SSAKLRKAKKIPKTRTGTRVRYWADRQIFLKDAKLNLETLHQRARQTAFLVPGLTIVVRD
EYGLGEGGTKGEESFRFDGGISEFCEYLAQDKAVCDVLRLSGQGSFKETVPVLDDHGQMT
PTEVTRDLVVDVAMRWGTGYDTTLRSFVNIIATPKGGTHVSGFERSLTKTMNEVLRSQKV
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVAQVIAKELKAFLT
STRRDAKAQARAVMDKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVERS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKASVSDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIILLVDADVDGAHIRILLLTLFQRYMRPMVEAGRVFAAVPPLHRIEL
VQPKKGQDKYVYTYSDNELRETLLEYQRKGIRFKDSIQRYKGLGEMDADQLAETTMDPRY
RTLRRVNIGDLDAAEQVFDLLMGNDVAPRKEFITSSAATLDRSRIDA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagacgtccgtgccgtccacagcattgctgaccggagcagaccgggacggt
tccaactacaccgcgcggcacctgctcgtcctggaggggctcgaagccgttcgcaagcgt
ccgggcatgtacatcgggtcgacggacagccgtggcctgctgcactgcctctgggagatc
atcgacaactccgtcgatgaggccctgggaggctactgcgaccacatcgaagtcatcctc
cacgacgacgcctcggtagaggtccgggacaacggccgaggcatcccggtggatgtcgag
cccaagaccggcctctccggagtcgaggtcgtcatgacgaagctccacgcgggcggcaag
ttcggcggtggctcgtacgccgcttccggcggcctgcacggcgtgggtgcctccgtggtg
aacgccctgtccgcgcgcctcgacgtagaggtggaccgcgcggggcacacccacgcgatc
agcttccgtcgtggtgttcccggagccttcgccaagcccggccccgacgccgacttcgac
tcgtcggccaagctgcgcaaggccaagaagatccccaagacgcgtacgggtacgcgggtg
cggtactgggcggatcgccagatcttcctcaaggatgccaagctcaatttggagacgctg
catcagcgtgcccggcagacggcgtttttggtgccgggtctgacgattgtggtgcgtgat
gagtacggtctgggggagggcggtaccaagggggaggagtccttccgtttcgacggcggg
atcagtgagttctgtgagtatctggcgcaggacaaggcggtgtgtgatgtgctgcggctg
tcggggcagggcagtttcaaggagaccgtgccggtcctggatgatcacgggcagatgacg
cccaccgaggtgacccgtgatctcgtggtggatgtggcgatgcgctggggcacgggctac
gacacgacgctgcggtcctttgtgaacatcattgccacgcccaagggcggcacgcatgtg
tcgggcttcgagcgctcgctgacgaagacgatgaatgaggtgctgcgcagtcagaaggtg
ctgcgggtggccgaggacgacatcgtcaaggacgacgccctggaggggctgaccgcggtg
gtcacggtgcgtctggcggagccgcagttcgaggggcagaccaaggaggtgctgggcacc
tcggcggccaaccggattgtcgcccaggtgatcgccaaggagctcaaggcgtttttgacg
tcgaccaggcgtgatgcgaaggcgcaggcgcgggcggtgatggacaaggcggtggccgcg
gcccgtacgcggatcgcggcgcgtcagcacaaggatgcccagcgccgtaagacggccctg
gagtcctcctcgttgcccgcgaagctggcggattgccgcagtgatgatgtggagcgcagc
gagctgttcatcgtggagggtgactcggcgctgggcacggcgaagctggcgcggaactcg
gagttccaggcgttgttgccgatccgggggaagatcctcaacgttcagaaggcgtccgtg
tcggacatgctgaagaacgccgagtgcggggcgatcatccaggtcataggggcggggtcg
gggcggaccttcgacatcgacgcggcccgctacgggaagatcattcttctggtggacgcc
gatgtggacggcgcgcacatccggatcctgctgctcaccctcttccagcgttatatgcgt
ccgatggtggaggcgggccgggtcttcgcggcggtgccgccgttgcaccggatcgagctg
gtgcagccgaagaagggccaggacaagtacgtctacacgtactcggacaatgagctgcgc
gagacgctccttgagtatcagcgcaaggggatccggttcaaggattccattcagcgttac
aagggtctgggtgagatggacgcggaccagctcgcggagacgacgatggatccgcgttat
cgcacgctgcggcgggtcaacatcggtgacctggacgccgccgagcaggtcttcgatctc
ctgatgggcaacgacgtggcaccccgcaaggaattcatcaccagctcagccgcgacgctg
gaccgctcgcgcatcgacgcgtag
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