Streptomyces durmitorensis: M4V62_12665
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Entry
M4V62_12665 CDS
T08503
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdur03009
]
M4V62_12665 (rimO)
Enzymes [BR:
sdur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M4V62_12665 (rimO)
Ribosome biogenesis [BR:
sdur03009
]
Prokaryotic type
ribosomal protein modification factors
M4V62_12665 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
UQT55884
LinkDB
All DBs
Position
complement(2864612..2866105)
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEAAEDADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGKTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYSDISTRLNTIL
SGGSVEAHTPRDRRKLLPISPAERQEAGSDVALPGHAPVDLPDGLAPASGPRAPLRRRLG
TNPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVAPYFDLSF
QHSAPGVLRAMRRFGDTDRFLELLDTIRTKAPQAGVRSNFIVGFPGESESDVDELERFLT
GARLDAIGVFGYSDEEGTEAATYDQKLDQDVVDERLARISRLAEELTSQRADDRLGETVE
VLVESVDDEDGAIGRAAHQAPETDGQIRFTGATGGDDLQVGRMVVAKVVGTEGVDLVAEY
SEILGDSPRIPAEEARR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtactgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctggcaggccgcctggaggcggacggctggcagctcgtcgaggccgccgag
gacgcggatgtcgccgtagtcaacacctgtggattcgtcgaagccgccaagaaggactcc
gtcgacgccctcctggaagccaatgatctcaagggtcatggcaagacccaggccgtcgtg
gccgtcggctgcatggccgagcggtacggcaaggagctcgccgaagccctccccgaagcc
gacggtgtcctcggcttcgacgactactccgacatctccacccgcctgaacaccatcctg
agcggcggcagtgtcgaggctcacaccccgcgtgaccggcgcaagctcctgccgatcagc
cccgcggagcggcaggaggcgggctccgacgtcgcgctgcccgggcacgcgcccgtggac
ctgcccgacggcctcgcgcccgcgtcggggccgcgcgccccgctgcggcggcgcctgggc
accaaccccgtcgcctcggtgaagctggcgtccggctgcgaccggcgctgctccttctgc
gccattccctccttccgcgggtccttcatctcgcggcgtccctcggacgtgctcggcgag
acgcgctggctggccgagcagggcgtcaaggaggtcatgctcgtctccgagaacaacacc
tcgtacggcaaggacctcggcgacatccggctcctggagacgctgctgcccgagctggcc
gccgtcgacgggatcgagcgggtgcgcgtcagctatctgcagcccgccgagatgcgcccc
ggactcatcgacgtactgacctccacggagaaggtcgccccctacttcgacctgtccttc
cagcactccgctcccggcgtgctgcgggcgatgcggcgcttcggggacaccgaccggttc
ctcgagctcctggacaccatccggaccaaggcgccgcaggcaggtgtgcggtccaacttc
atcgtgggcttccccggcgagagcgagtccgacgtggacgagctggagcggttcctcacg
ggtgcgcggctggacgccatcggcgtgttcgggtactccgacgaggagggcacggaagcg
gcgacgtacgaccagaagctggaccaggacgtcgtcgacgagcggctcgcgcgcatctcg
cggctcgccgaggaactgacctcgcagcgcgccgacgaccgtctcggtgagaccgtcgag
gtgctcgtggagtccgtggacgacgaggacggcgcgatcggccgggcggctcaccaggcg
cccgagacggacggccagatccgcttcacgggtgccacgggtggggacgacctgcaggtc
ggtcgtatggtcgtggcaaaggtggtcggcacggaaggcgtggacctggtggctgagtac
agcgaaattctgggggactcgccccggatcccggccgaggaggcgcgcagatga
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