Streptomyces durmitorensis: M4V62_12685
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Entry
M4V62_12685 CDS
T08503
Name
(GenBank) HAMP domain-containing protein
Organism
sdur
Streptomyces durmitorensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
DUF4795
Bac_export_3
Med21
ATG14
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
UQT55888
LinkDB
All DBs
Position
complement(2871110..2876617)
Genome browser
AA seq
1835 aa
AA seq
DB search
MESGAATRGTKTRAKDGQSQSKQRKPRHGATTSVDTAALNRLLAALAAMRDGNFRKRLTV
SGDDVMSEIAAVFNEVADRNLHLTGELSRVRRMVGREGKLTERLESGASEGSWAAAIDAS
NALVDDLVRPVSEVGRVLSAVAEGDLEQRMELRAQADEGNGHPLRGEFLKVGRTVNNLVD
QLSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVT
TAVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAQV
PGVAGVWKDLTDSVNLMAGNLTAQVRGIAQVTTAVANGDLSQKVTVSARGEVAQLAETIN
QMTETLRTFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDI
ATVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGAEVTRVAREIGVEGELGG
QAQVQGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLK
NTVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQ
VRQIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTEG
RLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEI
LELKNTLNTMVDQLSAFAEQVTRVAREVGTDGILGGQAEVQGVSGTWKDLTQSVNGMANN
LTLQVRNIAEVTTAVAMGDLSKKITVDAKGEILELVTTVNTMVDQLSNFAEQVNRVAREV
GTEGNLGGQARVPGVTGTWKDLSDNVNLMANNLTAQVRGISQVAAAVANGDLTKKVTVEA
RGEVAQLADTVNTMVKTLSSFADEVTRVAREVGTDGILGGQARVPGVSGTWKDLTESVNG
MASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEQVTRV
AREVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAEVATAVTRGDLNLKI
DVDAAGEIQVLQDNINSMIANLRDTTLANKEQDWLKGNLARISGLMQGRRDLADVASLIM
SELTPVVSAQHGAFFLALPTEDAPEPGAEQGDAYELRMMGSYGYSMGSMPTSFRPGETLI
GTAAQERRTILVENAPSGYLRIASGLGEAPPAQVIVLPVLFEGTVLGVIELAAFQAFTQI
QKDFLSQIAEMIATSVNTISVNTKTEVLLRQSQELTEQLRERSAELENRQKALQDSNAEL
EEKAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSL
LILAKLLADNADANLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIAL
VQLVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGA
VELVIRHANADVPNAIREQLLEAGSLRDADADLIAFSVSDTGIGIAGSKMRVIFEAFKQA
DGTTSRKYGGTGLGLSISREIARLLGGEIHAASEPGRGSTFTLYLPLHPSELPPQGYTQL
SPLPGTVARPALEEGPSTAEQQPQSEAPPTPRLDAVPDSGTLFRRRRRAAHASSEQPPVL
PGQGPTAEQRSQEQWAAAGQEAPEARPGYQFGGEKVLIVDDDIRNVFALTSVLEQHGLSV
LYAENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMK
GDREKAIDSGASDYVTKPVDPDHLLSVMEQWMRGE
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcactaaaacgcgcgcgaaagacggacagtcccag
agtaaacagcgcaaaccgcgccatggggcgactacgtcagtggacacggcggccctgaac
aggctgctcgcggcgctcgctgccatgcgggacggaaacttccgcaagcggctcacggtc
tccggcgacgacgtcatgtccgagatcgccgccgtcttcaacgaggtggccgaccggaat
ctgcatctgaccggtgagctctcccgggtgcggcgcatggtcgggcgtgagggaaagctc
acggagcggctggagagcggcgccagtgagggctcctgggccgcggcgatcgatgcgtcg
aacgccctcgtcgacgatctcgtacgtcctgtctccgaggtcggacgggtgctctccgcg
gtcgccgagggcgacctggagcagcggatggagctgcgggcgcaggcggacgaggggaac
ggccatccgctgcgcggggagttcctgaaggtcggccggacggtcaacaacctggtcgac
cagctctcgacgttcaccgacgaggtcacgcgggtggccagcgaggtgggcaccgagggc
aagctgggcggccaggcgcgggtgcgtggaatgtccggttcgtggaaggatctcacggat
tcggtgaacaccatggcgtaccggctgaccgcgcaggtacgtgacattgctctcgtcacg
acggcggtcgccaagggcgacttgtcccggaaggtgacggttcacgtcgccggcgagatg
ctggagctgaagaacaccgtcaacacgatggtggaccagctctcgtcgttctcctccgag
gtgacccgtgtggcgcgcgaggtgggcacggagggtgagctcggcggccaggcgcaggtg
ccgggtgtggcgggagtgtggaaggacctcaccgactcggtgaatcttatggccggcaat
ctcaccgcccaggtgcgtgggatcgcccaggtgacgacggccgtcgcgaacggcgatctg
tcccagaaggtgacggtgagcgcgcgcggcgaggtcgcccagctcgccgagacgatcaac
cagatgaccgagacgctgcgtacgttcgcggacgaggtcacccgggtcgcgaacgaggtc
ggcgccgaggggcagctgggcggtcaggcgaatgtgccgggcgccgcggggacgtggaag
gacctcaccgactcggtgaacacggtcttccggaacctcaccacgcaggtgcgggacatc
gcgacggtgacgacggcggtcgccaacggcgatctgtcgcagaaggtcaccgtcgatgtc
gcgggcgagatgctcgagttgaagaacaccgtgaacacgatggtggaccagctctccgcc
ttcggtgccgaagtgacgcgtgtggcgcgggagatcggtgtcgagggtgagctcggcggc
caggcgcaggtgcagggcgcggccggcacgtggaaggacctgacggactcggtcaacacc
gccttccgcaacctcacgggccaggtccgcaacatcgcgcaggtgacgacggcggtcgcc
aacggcgatctgtcgcagaaggtcaccgtcgacgtctccggcgagatgcttcagttgaag
aacaccgtgaacacgatggtggaccagctgtcgtcgttcgccgatcaggtcacgcggatg
gcgcgcgacgtgggcaccgaaggacgcctcggcggccaggcccgcgtggacggtgtcagc
ggcacctggaaggaactgaccgactccgtcaacttcatggcggggaacctgacgtcgcag
gtgcgccagatcgcccaggtcaccacggcggtggcccgtggtgacctgtcgcagaagatc
gacgtggacgcgcgcggcgagatcctggagctgaagaacaccatcaacacgatggtggat
cagctctcggccttcgcggaccaggtgacgcgggtggcccgcgaggtgggaacggaaggc
cgtctcggcggtcaggcgcaggtgcccggcgtggccggtgtgtggcgcgatctgaccgac
tccgtgaacggcatggccggcaacctcaccgcccaggtgcgcaacatcgcgcaggtggcg
accgcggtggcgcgaggcgacctgtcgcagaagatcgacgtggacgcgcgcggcgagatc
ctggagctgaagaacaccctcaacacgatggtggatcagctctcggccttcgccgagcag
gtgacgcgggtggcccgcgaggtgggcaccgacggcatcctgggcggccaggcggaggtg
cagggtgtctccggcacctggaaggacctcacgcagtccgtgaacggcatggcgaacaac
ctgacccttcaggtccgcaacatcgccgaggtcaccacggccgtcgccatgggcgacctc
tccaagaagatcaccgtcgacgccaagggcgagatcctcgaactcgtcaccaccgtgaac
acgatggtcgaccagctctcgaacttcgccgagcaggtcaaccgcgtggcccgtgaggtg
ggcaccgagggcaacctgggcggccaggcgagggtcccgggcgtcaccggcacctggaag
gacctcagcgacaacgtcaacctgatggcgaacaacctgaccgcgcaggtgcgcgggatc
tcccaggtcgccgcggcggtcgccaacggagacctcaccaagaaggtcaccgtcgaggcg
cgcggcgaggtcgcgcagctcgccgacaccgtcaacacgatggtgaagacgctgagttcg
ttcgcggacgaggtgacccgggtggcccgcgaggtgggcaccgacggcatcctcggcggt
caggcccgtgtgcccggagtctcgggtacgtggaaggacctgacggagtcggtgaacggc
atggcctccaacctcaccggccaggtccgcaacatcgcgatggtcaccaccgcgatcgcc
aagggcgatctgaccaagaagatcgacatcgacgcccggggcgagatcctcgaactcaag
accaccatcaacacgatggtcgaccagctgtcgtccttcgccgagcaggtcacgcgcgtg
gcccgcgaggtgggcacggaagggcagttgggcggccaggcgcgagtgcgggacgtcgac
ggtacgtggcgtgacctcaccgaatccgtgaacgagatggccgggaacctgacccgtcag
gtacgcgccatcgccgaggtcgccaccgcggtgacccgcggcgacctgaacctgaagatc
gacgtggacgcggcgggcgagatccaggtcctccaggacaacatcaactcgatgatcgcc
aacctccgcgacaccaccctggccaacaaggaacaggactggctcaagggcaacctggcc
cgcatctccggtctgatgcagggccgccgcgacctggcggacgtcgcctcgctgatcatg
agcgagctgacgcccgtggtctccgcgcagcacggcgccttcttcctggcgctgcccacg
gaggacgccccggagcccggcgcggagcaaggagacgcgtacgagctgcgcatgatgggc
agttacggctactccatgggctccatgcccacctccttccggcccggcgagacgctgatc
ggcacggcggcacaggagcggcgcacgatcctcgtggagaacgcgccgtccggctatctg
cggatcgcctccggtctcggcgaggcgccgcccgcccaggtgatcgtgcttccggtgctc
ttcgaggggaccgtcctcggcgtgatcgagctggccgccttccaggcgttcacgcagatc
cagaaggacttcctcagccagatcgcggagatgatcgcgacgagcgtcaacaccatcagc
gtcaacacgaagaccgaggtgctgctcaggcagtcgcaggagctcaccgagcaactgcgc
gaacggtcggcggagttggagaaccggcagaaggcactgcaggactccaacgccgaactg
gaggagaaggccgagctgcttgcccagcagaaccgcgacatcgaggtcaagaacaccgag
atcgaagaggccaggcaggtcctggaggagcgtgccgagcagctcgccgtctcgatgcgg
tacaagtccgagttcctggcgaacatgtcgcacgagctgcgtacgcccctcaactccctg
ttgatcctggccaagttgctggccgacaacgccgacgcgaacctcacccccaagcaggtg
gagttcgccgagacgatccacggggcgggatcggacctgttgcagctgatcaacgacatc
ctcgacctgtcgaaggtcgaggcgggcaagatggacgtctccccgacgcgcatcgccctg
gtgcaactcgtcgactacgtagaggccactttccggccgctgaccgcggagaaggggctc
gacttctccgtacgcgtgtctccggagctgcccgccaccctgcacacggacgagcagcgg
ctccttcaggtccttcgcaacctcctgtccaacgcggtgaagttcaccgactccggagcg
gtcgagctggtgatccggcacgcgaacgccgatgtgcccaacgccatccgcgaacagctc
ctggaggcgggttcgctgcgggacgcggacgcggatctgatcgccttctcggtgagcgac
accggcatcgggatcgcgggcagcaagatgcgggtgatcttcgaggcgttcaagcaggcc
gacggcacgacgagcaggaagtacggcggcacggggctcgggctctccatcagccgggag
atcgcgcggctgctcggcggagagatccacgcggcgagcgaaccgggccgcggttcgacg
ttcacgctctatttgccgctgcacccgagcgaactgccgccgcagggatacacacagctt
tccccgctgccgggaacggtcgcgcggcccgctctggaagagggcccctccacggccgag
cagcagccgcagagcgaggcgccgccgacgccgcggctcgacgcggtgcccgactccggc
acgctcttcaggcgccgccggcgtgccgcgcacgcctcttcggagcagccgccggtcctg
ccggggcaggggccgaccgcggagcagcggtcccaggagcagtgggccgcggcggggcag
gaggcgcccgaggcgcgtcccggctatcagttcggcggtgagaaggtgctcatcgtcgac
gacgacatccgcaacgtcttcgcgctcaccagcgtcctggagcagcacggcctctcggtg
ctgtacgccgagaacggccgtgagggcatcgaagtcctggaacagcacgacgacgtgacg
gtcgtcctgatggacatcatgatgccggagatggacgggtacgcgacgacgacggcgatc
cgcaggatgcctcagttcgccgggctcccgatcatcgcgctcaccgcgaaggccatgaag
ggcgaccgggagaaggcgatcgactccggagcgtccgattacgttacgaagccggtcgac
ccggatcatctgctctcggtgatggagcagtggatgcgcggggagtga
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