Streptomyces durmitorensis: M4V62_15710
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Entry
M4V62_15710 CDS
T08503
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdur
Streptomyces durmitorensis
Pathway
sdur03420
Nucleotide excision repair
sdur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M4V62_15710
03430 Mismatch repair
M4V62_15710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdur03400
]
M4V62_15710
Enzymes [BR:
sdur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M4V62_15710
DNA repair and recombination proteins [BR:
sdur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M4V62_15710
MMR (mismatch excision repair)
Other MMR factors
M4V62_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UQT56425
LinkDB
All DBs
Position
complement(3538651..3542202)
Genome browser
AA seq
1183 aa
AA seq
DB search
MPPRITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRQALVKAGVTDPEALDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTARLLADATRFQLAARVLREAPGPYPALTRSFPDLVSDLLALDSELAEH
LVRPDRLRAYDTELLRTLEGAKLSNADLRKVPETAEARLELAELVGRYRDAKRARDLLDF
GDQIALSATLADARAEVGEILREEFRVVLLDEYQDTSVAQRILLAGLFGGGTGHPVTAVG
DPCQAIYGWRGASVANLDDFPEHFAYADGRPAARHALSENRRSGGRLLDLANGLAEPLRA
MHAGVQALRPAPGAERDGMVRCALLRTHAEEIDWIADSIAHLVNTGKAPGEIAVLCRTAT
DFAQIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRI
GPRDLALLGRRARLLVRHGHAAPDDPDRRLAEAVEGVDPAEVISLADALDTFLETPLDDD
TEDDGLPFSPEARVRFARLAAELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDVAASFAANDSGASLLAFLAFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVVPHALRGDAATLPDIEAWDSRSMKAF
HEDMKEHQRTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLQALYDHCAVGHG
EIEAWADEPEEGEENPALVEGAAEHAWPLPLDDMSLARRRAAAQTVLTHLDRLTGEGASD
DARSHEEAHPSAYDDVPPAEDPDWPPPPEDEEAPYEEAGLPEADPEDWDSWTSARPAIPH
QSAAPPTEPDARPHPADAAAEPAPEPVAVPEEPRLTPEETRTLASWDRDLDALTGELLRA
REAIRDIPVPASLTASEVLHLAADPEGFAQELARPMPRPPQPAARRGTRFHAWVETRFEE
LRLPLLAPDDLPGGGPGEAEIADERDLEALKEAFERTEYAHRTPHRVEVPFQLTLAGRVV
RGRIDAVYKEVDGDDVTYEIVDWKTSRTRTADPLQLAVYRLAWAELHGVPPESVKAAFLY
VRSGETSRPARLPGRAELERILLEEPGGQPGDEPPDEPAPGGG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgccacctcgtatcaccgaccccgagcagctcaaagagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagacgacggtgatggcggcccgcgtggtctggctggtcggcacggggcag
gtcgctcccgagcaggtcctcggcctcacgttcacgaacaaggcggcgggcgaactcgcc
gagcgggtgcgccaggcgctcgtcaaggccggggtcaccgaccccgaggcgctcgacccg
gacaaccccccgggcgagccggtcatctccacgtaccacgccttcgcgggccgcctcctg
accgaccacggtctgcgcatagggctcgaacccaccgcccgtctcctcgccgacgccacc
cgcttccagctcgccgcgcgcgtgctgcgcgaggcgccgggaccgtatcccgcgctgacc
cgttccttccccgacctcgtcagcgacctcctcgcactcgacagcgagctcgcggagcat
ctcgtacggcccgacaggctccgcgcgtacgacaccgagctgctgcgcaccctggagggc
gccaagctctccaacgccgacctgcgcaaggtgccggagacggcggaggcacggctcgaa
ctggccgagctggtgggccgctacagggacgcgaagcgcgcccgcgacctcctcgacttc
ggcgaccagatcgccctctccgcgacgctggccgacgcccgcgcggaggtcggcgagatc
ctgcgcgaggagttccgggtcgtcctgctcgacgagtatcaggacacctcggtggcccag
cgcatcctcctggcaggcctcttcggaggcggcacgggccacccggtgacggcggtcggc
gacccctgccaggcgatctacggctggcgcggcgcctccgtggcgaacctcgacgacttc
cccgagcacttcgcgtacgccgacggacgccccgcggcccgccacgcgctcagcgagaac
cgccgcagcggcggccgcctcctggacctggcgaacggcctcgcggagccgctgcgcgcg
atgcacgcgggcgtccaggccctgcggcccgcgcccggcgccgagcgcgacggcatggtg
cgctgcgccctgctgcgcacgcacgccgaggagatcgactggatcgcggactccatcgcg
cacctcgtgaacaccggcaaggccccgggcgagatcgcggtcctgtgccgcacggcgacg
gacttcgcgcagatccagggagcgctggtcgcccgcgacgtccccgtggaggtcgtcggc
ctctccgggcttctgcacctcccggaggtcgccgacctggtcgccgtctgcgaggtgctc
caggacccgggcgcgaacgcctccctggtgcgcctgctgaccggcccgcgctggcgcatc
ggcccgcgcgacctcgccctcctgggccgccgcgcacgcctcctcgtacgccatgggcac
gcggcccccgacgacccggaccggcggctcgccgaagcggtcgagggggtcgatcccgcc
gaggtgatatcgctcgcggacgcgctcgacacgttcctggagacgcccctggacgacgac
acggaggacgacgggctgcccttctcgccggaggcgagggtgcggttcgcacgtctcgcc
gccgaactgcgcgatctgcgccgctccctggccgacccgctgatggacgtgctgcaccgg
gtgctcgccgtcacgggcctcgaagtcgaactctccgcgtcaccgcacgccctggcggcc
cgccgccgcgagaccctctcgaacttcctggacgtcgccgcctccttcgccgcgaacgac
agcggggcgagcctgctggccttcctcgccttcctgcggacggccgcgcagtacgagaag
ggcctggacaacgccctgcccggcggcgagaacacggtcaaggtgctcaccgcccacaag
tccaagggcctggagtgggacgtcgtggccgtccccggcctggtcaccgggacgttcccg
agcacccagggccgtgagaagtggacggcccagggcaaggtcgtcccgcacgcgctgcgc
ggggacgcggcgaccctgcccgacatcgaggcgtgggactcccggtccatgaaggcgttc
cacgaagacatgaaggagcaccagcgcaccgaggagctccgcctcggctacgtgaccttc
acccgcccccgctcgctgctcctgggctcgggccactggtggggcccttcgcagaagaag
ccgcgcggtccctcggacttccttcaggcgctgtacgaccactgcgcggtgggtcacggg
gagatcgaggcctgggcggacgaaccggaggagggcgaggagaaccccgcgctggtggag
ggcgccgccgagcacgcgtggccgctcccgctggacgacatgtccctggcccggcgcagg
gccgccgcgcagacagtcctcacgcatctggaccgcctgacgggggagggggcgtcggac
gacgcccgctcgcacgaagaggcccacccgtcggcgtacgacgacgtgcctccggccgag
gacccggactggccgccccctccggaggacgaggaagcgccctacgaagaagccgggctg
cccgaagccgaccccgaggactgggactcctggacatcggcccgcccggcgatcccgcac
cagtcggcagctccgcccaccgagcccgacgcccgcccgcaccccgccgacgccgctgcc
gagcccgccccggagccggtggccgtccctgaggagccccgcctcactccggaggagacc
cgcaccctcgcctcctgggaccgcgacctggacgctctcaccggcgaactcctgcgcgcc
cgcgaggcgatcagggacatccccgtccccgcctccctcaccgcgtccgaagtgctgcac
ctggccgccgacccggagggcttcgcgcaggagctcgcgcgccccatgccgcgcccgccg
cagcccgcggcccgccgcggcacccggttccacgcctgggtggagacccgcttcgaggag
ctgcgcctcccgctgctcgcccccgacgacctgccgggcggcggccccggcgaggccgag
atcgccgacgaacgcgatctggaagcgctcaaggaagccttcgagcgcaccgagtacgcc
caccgcaccccccaccgcgtcgaggtgcccttccagctgaccctcgcgggccgcgtggtc
cgcggccggatcgacgcggtgtacaaggaagtcgacggagacgacgtgacgtacgagatc
gtcgactggaagaccagccgcacccgcaccgccgaccccttgcagctcgccgtctaccgc
ctggcctgggccgagctgcacggggtgccgccggagtccgtgaaggcggcgttcctttac
gtgcgcagtggcgagacctcccgcccggcgcgcctgccgggccgggccgagctggagcgg
atcctgctggaagaaccgggcgggcagccgggtgacgaaccaccggacgaaccggctccc
gggggcggctag
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