Streptomyces durmitorensis: M4V62_20270
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Entry
M4V62_20270 CDS
T08503
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdur03032
]
M4V62_20270 (topA)
03400 DNA repair and recombination proteins [BR:
sdur03400
]
M4V62_20270 (topA)
Enzymes [BR:
sdur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M4V62_20270 (topA)
DNA replication proteins [BR:
sdur03032
]
Prokaryotic type
DNA Topoisomerases
M4V62_20270 (topA)
DNA repair and recombination proteins [BR:
sdur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M4V62_20270 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UQT57246
LinkDB
All DBs
Position
complement(4522971..4525802)
Genome browser
AA seq
943 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDKYTGE
VRRLGVDVENDFEPIYVVNADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLLEVL
KPKVPVKRMVFHEITKAAIQEAVASPRDLNKRMVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFGTGRTGDASDPSQLVARLTTVD
GKRIAQGRDFSSVGQLKSDTLHLDEANARSLAAALENTRFAVRSVESKPYRRSPYAPFRT
TTMQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAITAARAQVTQLYGSD
YLPDKPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQMKD
AVGNSVTVKIGGTAADGRDAEFNASGKTITFHGFMKAYVEGADDPNAELDDRERRLPQVS
EGDALSADEISVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKKG
TALVPSFLSFAVVNLLEKHFGRLVDYDFTARMEDDLDRIARGEAQAVPWLRRFYFGEGDD
AGAASSAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGEGIVLRVGRYGPYIERGEKDA
EGHQRADVPDDMPPDELTVEYAEELLAKPSGDFALGTDPTSGHEIIARDGRYGPYVTEVL
PEGTPKTGKNAVKPRTASLFKSMSLDTVTLADALKLMSLPRVVGADAEGVEITAQNGRYG
PYLKKGTDSRSLEAEEQLFNITLEEALAIYAQPKQRGRAAAKPPLKELGEDPVSGKPVVV
KDGRFGAYVTDGETNATLRAADSVEDITPERGYELLEEKRAKGPAKKTAKKAAKKAPAKK
TAAKKTAAKKTAAKKTTAAKKTTTKTAAAKKTAASAAQASDSE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcaaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggttacctcggccccggctacgtagtcgaggcgagcgtc
gggcacatccgcgacctccccaacggcgccgcggaggtacccgacaagtacaccggcgag
gtgcgccgtctcggcgtggacgtcgagaacgacttcgagcccatctatgtcgtgaacgcc
gacaagaaggcgcaggtcaagaagctcaaagacctgctgaaggactccgacgaactcttc
ctcgccaccgatgaggaccgcgagggcgaagccatcgcgtggcacctcctcgaggtcctg
aagcccaaggtcccggtcaagcgcatggtgttccacgagatcaccaaggccgcgatccag
gaggccgtcgcaagcccccgcgacctcaacaagcgcatggtcgacgcccaggagacccgc
cgcatcctcgaccgtctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggccggccgcgtccagtccgtggcgacccgcctcgtcgtcgagcgtgag
cgcgagcgcatcgccttccgctccgccgagtactgggacctgacgggcaccttcggcacc
ggccgcaccggtgacgcctccgacccctcgcagctggtcgcgcgcctcaccacggtcgac
ggcaagcgcatcgcgcagggccgcgacttcagctccgtcgggcagctcaagtccgacacg
ctccacctggacgaggcgaacgcccgctcgctcgccgcggccctggagaacacccggttc
gcggtccgctccgtcgagtccaagccctaccgccgctctccgtacgcgccgttccgtacg
acgacgatgcagcaggaggccagccgcaagctgggcttcggcgcgaaggccacgatgcag
gtggcccagaagctgtacgagaacggcttcatcacctacatgcgtacggactccacgacg
ctgtccgacacggcgatcaccgccgctcgcgcccaggtcacgcagctgtacggcagcgac
tacctgccggacaagccccgcacgtacgcggggaaggtcaagaacgcgcaggaggcgcac
gaggcgatccgtccttcgggtgatcgtttccgcacacccgccgagaccggcctgaccggc
gaccagttccggctctacgagctgatctggaagcggaccgtcgcctcccagatgaaggac
gcggtcggcaactccgtcacggtcaagatcggcggcaccgccgccgacggccgcgacgcc
gagttcaacgcgtccggcaagaccatcaccttccacggcttcatgaaggcgtacgtcgag
ggcgcggacgacccgaacgccgagctcgacgaccgcgagcgcaggctcccgcaggtcagc
gagggcgacgcgctgtccgccgacgagatctcggtcgacggccacgccaccaagccgccg
gcccgctacaccgaggcctcgctggtcaaggagctcgaagagcgcgagatcggccgcccg
tcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctacgtcttcaagaagggc
acggcactggtgccctccttcttgtccttcgccgtggtcaacctcctggagaagcacttc
gggcggctcgtcgactacgacttcaccgcccgcatggaggacgacctcgaccgcatcgcg
cggggcgaggcgcaggccgtgccgtggctgaggcgcttctacttcggcgagggcgacgac
gcgggtgccgcgtccagcgcgggcaacggcgacggcgaccacctcggcgggctcaaggag
ctggtgaccgacctgggcgcgatcgacgcccgggagatctcctccttccccgtcggcgag
ggcatcgtgctgcgggtcggccgctacggcccgtacatcgagcgcggtgagaaggacgcg
gagggccatcagcgtgccgacgtgcccgacgacatgccgccggacgagctgaccgtcgag
tacgccgaggagctgctcgccaagccgagcggcgacttcgcgctcggcaccgaccccacg
tcgggtcacgagatcatcgccagggacggccggtacggcccgtacgtcaccgaggtgctc
cccgagggcactccgaagaccggcaagaacgcggtcaagccgcggacggcctcgctcttc
aagtcgatgtcactcgacacggtgacgctggcggacgccctgaagctgatgtccctgccg
cgtgtggtgggcgccgacgccgagggtgtcgagatcaccgcgcagaacggccgctacggc
ccgtatctgaagaagggcacggactcgcgctccctggaggccgaggagcagctcttcaac
atcacgctggaagaggccctcgcgatctacgcccagcccaagcagcgcgggcgggccgcc
gccaagccgccgctgaaggagctcggcgaggacccggtcagcggaaagccggtcgtcgtc
aaggacggccgcttcggggcgtacgtcacggacggcgagacgaacgcgacgctgcgggcc
gccgacagcgtcgaggacatcacccccgagcgtggctacgaactgctcgaggagaagcgg
gcgaagggcccggccaagaagaccgccaagaaggcggcgaagaaggccccggccaagaag
accgccgccaagaagacggctgccaagaaaacggccgccaagaagacgacggccgcgaag
aagaccactacgaagaccgcggccgccaagaagaccgcggcttcggcagcgcaggcgtcc
gactccgagtag
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